RNA id: TCONS_00067569


Basic Information

Item Value
RNA id TCONS_00067569
length 1752
RNA type mRNA
GC content 0.50
exon number 11
gene id XLOC_034719
representative True

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 24508123 ~ 24520866 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ACAGTTAAATGCAAGAGGTGTGGTAGCATatggtgtgtgtctgtatataatGCACCTGTCCCGATCTCTGCTCGCAGCACAATGGGTCTGACGCTCGGGGAGCGCGTGCAGCACTGTCTGCTGGTCCTCGTGTCCGGGCTGTTTCTGCCTCTCTTCAGGCTGCTTTCACCTGGCACAAAGCGTCCAAAACATCTTCCTCCAATCACAAACCCGCTGCTTACTCTCTCGGCAGTGCAGCTGGCTGAGAAGATACGCAGAAGAGAGGTTAGCAGTGTGGAGGTTGTGCAGGCGTATATTGACAGGATTCAGGAAGTGAACCCACTGCTCAATGCTTTGATCAAAGACAGGTTTTCTGCTGCCCTTCTGGAGGCAGCTCGTGCAGACAAACTAATAAAGGAGGAAAATGGAGGAGAGGAAGTTCTGAGGAACCAGTTTCCTCTGCTTGGTGTTCCAATGTCTGTCAAAGAGTCATTCGGACTACAGGGCATGCCTAATTCAGGCGGGTTGAAATCCCGGGGTAAAGTGCTTGCCAGTGTGGACGCTCCTCCTGTGGCTCTATTGAAGAGAGCGGGAGCAATTCCTCTCGGTGTCACCAACACCAGCGAGCTCTGCATGTGGATGGAGTCCAACAACCATCTCTACGGGATCACCAGTAACCCCTACAACCTTGAGAGGATCTGTGGAGGAAGCTCAGGTGGAGAGGGAAGCATCATCGGTGGTGGTGCGTCTGTGTTTGGCATCGGCTCTGACATTGGAGGAAGTATCCGTATGCCGTGTTTTTTCAATGGGATTTTTGGACACAAACCCTCAAGAGGTGTTGTCTCAAATGACAATCAGTTTCCCAGATGTTCTGGTCTCCAGAATGAATACACAGGTTCTGGTCCAATGTGTCGCTACGCTGAAGACCTGCTCCCCCTTCTGAAGATCATGGCTGGACCCACTGCAGACAAACTTACCCTCTCAAAAGCGGTGGATCTGAAAAAGTTGCGTTTCTTCACTATAGTAGATGATGGCGGATCTCCTCTGACATCTCCTGTAGACAGACAACTTGTTGAAGTTCAAAAGCGGGTTGCTGCTCGTTTAGAGGCAGATCTGGGAGTCACGGTTCAGGAAGTTAATTTTCCGCAGCTCAAATACTCTTATCAGATCTGGGACACATTCTTGGCACTTCCGGACAAAGATGGCAAGCCTCCAGAGGCTTTTGTTGAGCTGATGGCAGACGGAGGCTCTGTGTGGCCGGTTTGGGAGCTGATAAAGAGGATATTTGGAAGATCTGAACACACTGTGGCTGCTATCGGTTTGGCACTGATGGAGAGTTCCCACAGCTCCAAGTCATCTGAGTTTATCCTGAAACAGAAGGAGGATCTGCAGAGGGAGATGGAGGATCTGCTAGGGACAGATGGAGTGCTGCTGTACCCCTCTCACCCTCTTCTCGCACCCAAACACCATCATCCACTTTTTATGCCATTCAACTTCAGTTACACAGGAATTTTAAACATCCTGGGCCTGCCAGTGACCCAGTGCCCCCTGGGGTTGAGTAAGGAGCGACTGCCCTTGGGTGTGCAGGTGGTGGCTGGGTTGTGTCAAGACCATCTGACCTTAGCTATGGCGCTCTACCTGGAGAAGGCTTTTGGAGGCTGGGTCGATCCAGGAGTGGTTTAATCACTGAAGGAAATGCAAGTTAAAAATGGACAACCTCAACACCCTGTATTTCGTCCACATGAAGTAAAGCGatttgtttagtaaaaaaaa

Function

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0016042 lipid catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0103073 anandamide amidohydrolase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0102077 oleamide hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061027-358 Predicted to enable anandamide amidohydrolase activity and oleamide hydrolase activity. Predicted to act upstream of or within lipid catabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in intestinal bulb. Orthologous to human FAAH2 (fatty acid amide hydrolase 2).

Ensembl:

ensembl_id ENSDART00000077039

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00067564 lncRNA downstream 117301 24380184 ~ 24390822 (-) False XLOC_034716
TCONS_00067565 lncRNA downstream 117308 24380297 ~ 24390815 (-) True XLOC_034716
TCONS_00067563 lncRNA downstream 117316 24378221 ~ 24390807 (-) False XLOC_034716
TCONS_00067559 lncRNA downstream 143297 24360147 ~ 24364826 (-) False XLOC_034714
TCONS_00067560 lncRNA downstream 143408 24362306 ~ 24364715 (-) True XLOC_034714
TCONS_00069205 lncRNA upstream 60101 24580967 ~ 24586171 (-) False XLOC_034720
TCONS_00069206 lncRNA upstream 60101 24580967 ~ 24589865 (-) True XLOC_034720
TCONS_00067571 lncRNA upstream 72396 24593262 ~ 24621696 (-) True XLOC_034721
TCONS_00067587 lncRNA upstream 463496 24984362 ~ 24985394 (-) False XLOC_034729
TCONS_00069207 lncRNA upstream 469093 24989959 ~ 24994722 (-) True XLOC_034729
TCONS_00067567 mRNA downstream 16226 24485048 ~ 24491897 (-) False XLOC_034718
TCONS_00067568 mRNA downstream 16509 24486410 ~ 24491614 (-) True XLOC_034718
TCONS_00067566 mRNA downstream 35132 24457191 ~ 24472991 (-) True XLOC_034717
TCONS_00067562 mRNA downstream 117244 24375070 ~ 24390879 (-) False XLOC_034716
TCONS_00067561 mRNA downstream 134461 24366962 ~ 24373662 (-) True XLOC_034715
TCONS_00067570 mRNA upstream 72343 24593209 ~ 24621689 (-) False XLOC_034721
TCONS_00067572 mRNA upstream 106210 24627076 ~ 24644004 (-) False XLOC_034722
TCONS_00067573 mRNA upstream 110664 24631530 ~ 24644893 (-) False XLOC_034722
TCONS_00067574 mRNA upstream 123023 24643889 ~ 24645540 (-) True XLOC_034722
TCONS_00067575 mRNA upstream 160412 24681278 ~ 24699985 (-) True XLOC_034723
TCONS_00067552 other downstream 315043 24187581 ~ 24193080 (-) False XLOC_034711
TCONS_00067518 other downstream 1570875 22937129 ~ 22937248 (-) True XLOC_034690
TCONS_00067494 other downstream 2671257 21836676 ~ 21836866 (-) True XLOC_034675
TCONS_00067493 other downstream 2677273 21830686 ~ 21830850 (-) True XLOC_034674
TCONS_00067492 other downstream 2684596 21823363 ~ 21823527 (-) True XLOC_034673
TCONS_00067584 other upstream 319835 24840701 ~ 24853898 (-) True XLOC_034727
TCONS_00067600 other upstream 770167 25291033 ~ 25291152 (-) True XLOC_034734
TCONS_00067607 other upstream 1242318 25763184 ~ 25763298 (-) True XLOC_034737
TCONS_00067608 other upstream 1270363 25791229 ~ 25791355 (-) True XLOC_034738
TCONS_00067631 other upstream 1779929 26300795 ~ 26304876 (-) False XLOC_034753

Expression Profile

//

Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) CI01000026_01011341_01018429.mRNA True 2344 mRNA 0.44 11 CI01000026 1010618 ~ 1018469 (-)