RNA id: TCONS_00068102


Basic Information

Item Value
RNA id TCONS_00068102
length 115
RNA type rRNA
GC content 0.55
exon number 1
gene id XLOC_035020
representative True

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 44906299 ~ 44906413 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCCACAGCCATATCCCCCTGCAGCCCatgaccggttactcactgaagctaagcagggctgagtcttgtcagtacctggatgggcgACCATGAGAAAACTAGGTGGCTGTTGGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000175548

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00069285 lncRNA downstream 171226 44730329 ~ 44735073 (-) True XLOC_035017
TCONS_00068699 lncRNA downstream 292378 44611449 ~ 44613921 (-) False XLOC_035013
TCONS_00068092 lncRNA downstream 292378 44611623 ~ 44613921 (-) False XLOC_035013
TCONS_00068094 lncRNA downstream 292405 44612071 ~ 44613894 (-) True XLOC_035013
TCONS_00068093 lncRNA downstream 293378 44611967 ~ 44612921 (-) False XLOC_035013
TCONS_00068700 lncRNA upstream 508151 45414564 ~ 45415894 (-) True XLOC_035024
TCONS_00069286 lncRNA upstream 744686 45651099 ~ 45664239 (-) False XLOC_035025
TCONS_00068109 lncRNA upstream 745066 45651479 ~ 45814247 (-) False XLOC_035025
TCONS_00069287 lncRNA upstream 906889 45813302 ~ 45814275 (-) False XLOC_035025
TCONS_00069288 lncRNA upstream 906889 45813302 ~ 45814324 (-) True XLOC_035025
TCONS_00068098 mRNA downstream 111977 44773912 ~ 44794322 (-) True XLOC_035018
TCONS_00068097 mRNA downstream 201389 44674956 ~ 44704910 (-) True XLOC_035016
TCONS_00068095 mRNA downstream 234204 44628681 ~ 44672095 (-) True XLOC_035014
TCONS_00068091 mRNA downstream 301243 44602739 ~ 44605056 (-) True XLOC_035012
TCONS_00068089 mRNA downstream 301249 44599927 ~ 44605050 (-) False XLOC_035012
TCONS_00068103 mRNA upstream 53775 44960188 ~ 44963154 (-) True XLOC_035021
TCONS_00068104 mRNA upstream 59360 44965773 ~ 44970994 (-) False XLOC_035022
TCONS_00068105 mRNA upstream 60751 44967164 ~ 44970682 (-) False XLOC_035022
TCONS_00068106 mRNA upstream 60877 44967290 ~ 44970870 (-) False XLOC_035022
TCONS_00068107 mRNA upstream 60919 44967332 ~ 44970952 (-) True XLOC_035022
TCONS_00068096 other downstream 238182 44668003 ~ 44668117 (-) True XLOC_035015
TCONS_00068078 other downstream 1343059 43563124 ~ 43563240 (-) True XLOC_035008
TCONS_00068074 other downstream 1573557 43332628 ~ 43332742 (-) False XLOC_035005
TCONS_00068072 other downstream 2094130 42812055 ~ 42812169 (-) True XLOC_035002
TCONS_00068070 other downstream 2615205 42290978 ~ 42291094 (-) True XLOC_034998
TCONS_00068110 other upstream 834079 45740492 ~ 45740608 (-) True XLOC_035026
TCONS_00068120 other upstream 1319831 46226244 ~ 46226360 (-) True XLOC_035035
TCONS_00068134 other upstream 3054764 47961177 ~ 47961293 (-) True XLOC_035046
TCONS_00068139 other upstream 3340621 48247034 ~ 48250085 (-) False XLOC_035050
TCONS_00068142 other upstream 3347309 48253722 ~ 48257268 (-) False XLOC_035051