RNA id: TU186046


Basic Information

Item Value
RNA id TU186046
length 322
lncRNA type inter_gene
GC content 0.52
exon number 4
gene id G138141
representative True

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 32861736 ~ 32970924 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acgcagacacacacgcagacacacacgcagacacacacacacacacgcagacacacacgcagacacacacgcagacacacacgcagacacacacgcagacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacagagaacacacacacacacacacacacacacacgtacgcacagaaaacacacacacacacacacacacacacacacagacacacacacgcacacacacagacacacacacagacacagacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU186008 lncRNA upstream 4063 32738245 ~ 32857673 (+) True G138118
XR_005641194.1 lncRNA upstream 8125 32791827 ~ 32853611 (+) True LOC120571116
TU186014 lncRNA upstream 26443 32818143 ~ 32835293 (+) True G138124
TU186006 lncRNA upstream 121714 32732810 ~ 32740022 (+) True G138117
TU186005 lncRNA upstream 143612 32715990 ~ 32718124 (+) True G138116
TU186028 lncRNA downstream 12838 32983762 ~ 33020409 (+) False G138130
TU186031 lncRNA downstream 16673 32987597 ~ 32990790 (+) False G138130
TU186035 lncRNA downstream 40657 33011581 ~ 33066816 (+) True G138133
TU186073 lncRNA downstream 116935 33087859 ~ 33088448 (+) True G138167
TU186082 lncRNA downstream 172470 33143394 ~ 33144614 (+) False G138174
XM_039819634.1 mRNA upstream 99751 32744589 ~ 32761985 (+) True LOC120570938
XM_039819790.1 mRNA upstream 130182 32710841 ~ 32731554 (+) True LOC120571107
XM_039819799.1 mRNA upstream 274294 32573800 ~ 32587442 (+) True LOC120571112
XM_039819800.1 mRNA upstream 274932 32573800 ~ 32586804 (+) False LOC120571112
XM_039819805.1 mRNA upstream 304337 32538277 ~ 32557399 (+) False LOC120571115
XM_039821249.1 mRNA downstream 185897 33156821 ~ 33160537 (+) True LOC120572046
XM_039821251.1 mRNA downstream 191452 33162376 ~ 33200180 (+) True LOC120572048
XM_039821253.1 mRNA downstream 191452 33162376 ~ 33183468 (+) False LOC120572048
XM_039821250.1 mRNA downstream 191452 33162376 ~ 33177268 (+) False LOC120572048
XM_039821254.1 mRNA downstream 191452 33162376 ~ 33167357 (+) False LOC120572048
TU185992 other upstream 165467 32641641 ~ 32696269 (+) True G138105
XR_005641193.1 other upstream 295574 32538277 ~ 32566162 (+) True LOC120571115
TU185946 other upstream 356760 32430410 ~ 32504976 (+) True G138076
XR_005641241.1 other upstream 858056 31995001 ~ 32003680 (+) True LOC120571558
TU185635 other upstream 1219273 31617595 ~ 31642463 (+) False LOC120570800
TU186021 other downstream 12838 32983762 ~ 32990790 (+) True G138130
TU186022 other downstream 12838 32983762 ~ 32990790 (+) False G138130
TU186023 other downstream 12838 32983762 ~ 32990790 (+) False G138130
XR_005641346.1 other downstream 191452 33162376 ~ 33177268 (+) False LOC120572048
TU186089 other downstream 191492 33162416 ~ 33195323 (+) True G138177

Expression Profile