RNA id: TU231094



Basic Information


Item Value
RNA id TU231094
length 368
lncRNA type intronic
GC content 0.47
exon number 1
gene id G170444
representative True

Chromosome Information


Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 32011473 ~ 32011840 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGCTTCTCGGCACGTTTCCCCGTGCACGGCCAGCTCTCTCATCAGCTATCAGGTGCTGTTGGGATATCACTTATCTCCTCTACAGTTGCTGCACTCTCTGCCCATGTGGTATAACTAACCTCCAACACTTCCTGGGGATCTCCTTTGACACATTATACAATCCGAGATGGAAATTAAGCCTGTGACTCATTTAGTCATTGCCTTACTATTTCAGTCAGTTAGTCACCACTCACATTCTGACTTCCCCAACCTTCTCTCACATACACTGAAATATCCATCTACACATGCAACTGTTCCCATGCCACCTCGTAGCCAGTGGTCTCTCTCCCCTACATTATTGCTGAGGCAGCATGATGTTGGTTtattcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU231081 lncRNA downstream 11345 31963600 ~ 32000128 (-) True G170432
TU231072 lncRNA downstream 104487 31902012 ~ 31906986 (-) True G170425
TU231071 lncRNA downstream 110329 31900086 ~ 31901144 (-) True G170424
TU230966 lncRNA downstream 265789 31744851 ~ 31745684 (-) True G170332
TU230927 lncRNA downstream 421460 31579840 ~ 31590013 (-) False LOC120544288
TU231096 lncRNA upstream 9507 32021347 ~ 32021731 (-) True G170446
TU231082 lncRNA upstream 63555 32075395 ~ 32078473 (-) True G170433
TU231101 lncRNA upstream 148808 32160648 ~ 32160862 (-) True G170451
TU231116 lncRNA upstream 213410 32225250 ~ 32225792 (-) True G170465
TU231166 lncRNA upstream 377877 32389717 ~ 32389988 (-) True G170512
XM_039777387.1 mRNA downstream 43831 31917787 ~ 31967642 (-) False arhgap32b
XM_039777386.1 mRNA downstream 43831 31917787 ~ 31967642 (-) False arhgap32b
XM_039777385.1 mRNA downstream 43831 31917787 ~ 31967642 (-) False arhgap32b
XM_039777384.1 mRNA downstream 43831 31917787 ~ 31967642 (-) True arhgap32b
XM_039777388.1 mRNA downstream 63036 31917787 ~ 31948437 (-) False arhgap32b
XM_039777394.1 mRNA upstream 67136 32078976 ~ 32090441 (-) False vps26bl
XM_039777393.1 mRNA upstream 67136 32078976 ~ 32090441 (-) True vps26bl
XM_039777962.1 mRNA upstream 87377 32099217 ~ 32144087 (-) True LOC120544316
XM_039777929.1 mRNA upstream 481220 32493060 ~ 32567042 (-) True esama
XM_039778275.1 mRNA upstream 566257 32578097 ~ 32589328 (-) True LOC120544484
TU230664 other downstream 1052975 30957501 ~ 30958498 (-) True G170098
TU230602 other downstream 1160460 30849319 ~ 30851013 (-) False LOC120543892
TU230603 other downstream 1181530 30829067 ~ 30829943 (-) False LOC120543890
TU230595 other downstream 1272206 30738055 ~ 30739267 (-) False LOC120543890
TU230450 other downstream 1596780 30411251 ~ 30414693 (-) False si:ch73-1a9.3
TU231114 other upstream 189869 32201709 ~ 32202206 (-) True G170463
TU231185 other upstream 431446 32443286 ~ 32491305 (-) True LOC120543978
XR_005636561.1 other upstream 2267462 34279302 ~ 34279394 (-) True LOC120544758
XR_005636560.1 other upstream 2269085 34280925 ~ 34281017 (-) True LOC120544757
TU231512 other upstream 2297154 34308994 ~ 34309714 (-) True G170802

Expression Profile