RNA id: XM_039777384.1


Basic Information

Item Value
RNA id XM_039777384.1
length 7153
RNA type mRNA
GC content 0.53
exon number 20
gene id arhgap32b
representative True

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 31917787 ~ 31967642 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTGCTAACTGCTGTCTGAGCTGCCTCGATTGGACAGTCTGACTGACCAGTCAGAGTCAGTTTCCCAGATGTTGTTGGCTTACCTCTCCCGGCTCTCAGCCATCGCTGACAACAAGATCAACTGTGGGCCCGCCCTCACGTGGATGGAGgttgACAATAAGGGAAATCATCTGCTGGTTCATGAAGAGTCGTCCATCAACGTGCCAGCTATCGCTGCCGCCCACGTCATCAAGCGCTACATCGCCCAGGCCTCAGACGAGCTGTCCTTCGAGGTTGGCGACATCGTGTCAGTGATCGACATGCCCCCTAAAGAAGACACCACATGGTGGAGGGGCAAGCATGGCTTTCAGGTTGGCTTCTTTCCCAGCGAGTGTGTGGAGCTCATAAATGATAAAGTGCCACAGTCCATGACCAACACGGTGCCAAAACCAgGCTGTCAAAATGTTAATGACGagttcaaagcccttccagatggttctctccacaagactAAAGTCATCTGCATGTACTGTCGATcctccccctgctctggcctGCAGCCTGCTTCTTGGAATCTCTTCCCCCCCTACTTGGAGATGGAGAGTGTAATACAGGACAGTGCATGGGTGGCCGACCCGCTAAACCACTACAACCTAAGTTCAGTGTCTAAGAAGCACGGGAAGCTGATCACATTCTTGCGTACCTTCATGAAGTCCCGGCCCACCAAGCAGAAGCTGAAGCAGAGAGGCATCCTCCGGGAGAGGGTGTTCGGCTGCGACCTGGGAGAACACCTCCTCAACTCAGGACATGACGTGCCCCAGGTCCTCAAGAGCTGCACCGAGTTCATCGAGAAGCATGGTGTGGTGGACGGAATGTACCGCCTCTCTGGAATCGCCTCAAATATCCAGAAATTGCGGCACGAGTTTGACTCTGAGCAGATCCCCGACCTGACCAAAGATGTCTACATCCAGGATATCCACTGTGTCGGCTCGCTGTGCAAGCTCTACTTCAGAGAGCTGCCCAACCCCCTGCTCACCTACCAGCTCTACGAGAAATTCTCTGATGCTGTGTCAGCGGCAACGGACGAAGAACGACTCATCAAAATCCATGATGTCATCCAGCAGCTTCCTCCACCGCATTACAGGACCCTGGAGTTCCTGATGAGACACCTTTCGCACCTGGCAGCGTTCAGCTACATCACCAACATGCACAGCAAGAACCTGGCCATCGTCTGGGCACCCAACCTGCTCAGGTCCAAACAGATTGAATCTGCGTGCTTCAGTGGCACAGCAGCCTTCATGGAAGTCCGAATCCAGTCGGTGGTGGTGGAGTTCATCCTCAACCATGTGGACGTTCTCTTCAGCACTAAACTTAGCTCACTCATACGAGAGGGCGCAGGTCACAACTCGCTGTCACGGCCCAAATCCCTGCTGGTTTCATCGCCCTCCACTAAACTCCTGAGTCTGGAGGAGGCCCAGGCCAGGACCCAGGCTCAGATCAACTCTCCAGTCACTGAAGACAGTAAATACATCGAGGTGGGCGAAGGTCCGGCGGCCCTGCAGGGAAAGTTCCACACGGTCATCGAGTTTCCCACCGAGAGGAAGAGGCCTCCTATTAAATCCAAGAAGTCTCCTGTGGGTAGTTGGCGTTCTTTCTTCAACCTGGGCAAGTCTTCCTCCATGTCCAAGCGCAAGCTGCCCCGCAACCCCAGTGAGCCCAATGAACTAAAGGCCATGGCTCTCGCCGGAGGCCGAGGAGACACGGCAACATTAAGATCGGCCAAAAGTGAAGAGTCACTGAGTTCCCTGCACAATGTTGAAGGAGAGTCCAAGCTGTACCGTCCTCGGCGGCCGCGCTCCAGCAGCGATGCCCTGTCAGCTTCATTTAATGGCGAGCTGCTGGACAGCCGACAGCACTGCAACTCTTACGACAACCTGGACGCTACGGAGGACAGCGACGGAGACGACGGGCCCATCTGTGTGCCGGCCCTCATCTCCCCTCCCCGCTCGGCAGGTGAAGATGTGGACCTCAGCCCGCCAGACATTGGCATGGCCTCCTTGGACTTTGACCCCATGTCTTTCCAGTGCAGTCTCCCCGATACCTCTTACGCCTTCCCCCTGGATGATTCACCCGCTGGGGCTGAGGGTTCCACGCTAAAGAGGAGCCCCGGTAGCATCTGTGGCAAGACCAATGGCTCTGACCTCATCTCTGCTACCTTCCTGGGTAGCTTGATGTCCCCCTTGTTGTCCACAGACTTCTGCCTGGCTGCTGGAGAGAAGGTGGAAAGCAAGAAACTGCCCACTTCCTATTCTTACACCGATAAACCAACACAGGCCGTGTCGCCTATTAAATGTGGAAAGACCACTAGTTTAACACCATTTGCATCTTCGGAGCTTTTCGCTACCGAGATGCCTGACAAGAATACAGCTGGAAAGGCTGTCTCTCCACAACCATTATCTCCTCCTCCAGTAGTCAAGGACTCTCCTCCCCTGATGGGCAGTGTGCTGCTGAGGGCAGCCGAGCCGTCGCTAAGTGAAGCTTTCCAAATGGAGCTGCACTCTAAGCTGACGGGCTGTGACAGCGTGGACAGCCGAGAGCTGAAGGGAGAGGACAGCATACAGCAGGCGCCAGCTGCCAGCAGCCAAGAGGACCATGGAGTCGTAGCTCCGGACTCTTCAAAGGACCTCACCCCTCGTTCCCTCAGCACTACAGCTCCCACTATtgcccctcttcctcctcctccccctcctaaAAATGCTGCCCGCATGTTGGCCCTGGCCCTGGCAGAGTCTGCCCAGCAGGTCTCCAGTCAGTCTCAGTCCCGGTCCTCTGAGCCCTCCACACCGCTGTCCCCTCTGCTGCAACAGGAGGCCTCTGATTTCCAGGACTCGCCACATCCTCGGGTCCCACAtttccacacttcctcctccgAGGGAACAGGAACAGGAAGTTCCCCGCCACCACACAGCACTGCTCCGACCGTCACTCCAGCCTCATCTTGTCCCTCCACTTCCAGTCCTACAATCAAACAGCAGCCTCTAGAGTTTACCAGCACGATTACCAAGCCGCCAGCCAGTACCGAGTCCTCTACGACTCCACCTGCAACACAGCCAGAAACAGACTCCACCCCACCAGACACTCCTTGTTACAAGTGTGCCCCAGTCGCCAGTTCAACCAACCTGACTTCTCCGATCAGGAAAAGTCCCGAAAGGCAGCAGCCTGTCCCAGGACCGGCCCAAGGACAGGCCCCAGGACAGGTCCTAGGACAGGCCCCAGTCCGTCCCAGCTCATCTAGTACCACTCCAGCCACCTTCCCCAGTGGCAGCTGCAAAGATACTAGAGTCTTACCACAGCTTGTTCCTGAGGTCAAACCAGAGGAGACTGCACCACCCCCTGTCCTTCCAAAACCATCAGAGCAGCCCCCTCCAGCAATTCAAAAGCCCAAGAGGCATGCAGTCTCACTGCCCAAGCATCAAACGCAAAAAACTCAGCAACAGAGCCCAGCTCAGATACAGCCTCTTCCAACACCGCCTCAGACACAGGTCCAGCCCCAAACACAACCTCAGCTCCCCTCGAAGGCCAGCGCAAGAGTGGCCCCCACCTCTGCTGAGCCTGTTGAGAAACCTTGGGAGGCCATAAAGCCGGTACAGCCCTGTACAGAGTCTGCAAAGTACCACAACGTGTACGGACCCACACCTCCAGCCCCTCCTGTCCGCACCATAGAGAGCAAACTGGCCACAGCTGCACTCAGCCAAAGTGAAGCCTCCTATATTCTGGGTGAAGGCCCGGTGCCTAGCCATCTAGAGGATGCCCTGCCTCACCATCCCCCTTCTCCTCGTAAATCTTCCACGCACCAGCCAGCCTACCTGTACCACGCTAAAGGAGAACCGGTCTTAATTGAGCCTCCAGGAGCTGCATACTACCACCAGAGGCCGGTTCCGCTGGGCCCGCAGTCCATGCCACACCACTTCCGGCCCGACAGCGTCCCCCCACACCTCTCCTGTGTGTCCAAATCAGAGCCTCAGATACCTTACAGTGCCCGACTAGACAACAGATACAGCACTTTAGGCCCCGGGTCCCACCACCACTCTATGAAGTCCAGAGGAAACCCCCGCAGCGTGTACGTGTCTCCGGGGCCGGGGCATCAGGGTTATAGCCATGACAGAAACCAAGGCTATCCCACCATTCGCAGAGTACACTCGCTCCATGTTCCTTCCACTATCCGCTCAGTGCCCATCCAAAGGACTGAAGTTCCTCCAGATGACGAGATGTTCTTCTACCATCGGCCCACGTATCAGTGCAAAGCCTACCAGCAGCCCCCGCAGCAGCCCCCGCAGCAGTCCTCACAGACCGACTACCACGTCACCCAGCTGCAGCCTTACTTTGAGAACGGACGGGTTCAGTATCGCTACAGTCCATACTCTGGTTCGAGCCCTTTGGAGGCGCCTTACTACGACATTGACCCTTACGGCACCATCCGAGTCCGACACCTCCACTCCCATGGCGGCCGAGATCCGGGAGCCGCTGCTGGTCGACAGGGCGGAAAGGCGACCGGGTACCACTACCTCGCTCGCCATGTCATCCCACCTGGTAAGGAGCACAGCTTTGTGAGCAGGGACATGCCCCCCAGTCACGGGGCCAAGGAAGCTGCTGCTTACCTCGTTTGGGACCCCGAGGAGTGCGAAAGGCTCCGCATGCACTCCATCCGCAGGGAGAGCAGGGCCAGACAGAAGATTAAAGGCCCTGTCCTCTCCCAGTACGACAACGTCGGCATGTTTGCACCAGCAGATATACCTAGCTATGAAACCCTGCACCTGCGCAGCAAGTCTGACCCAGGCAAAGCTGTGCTGGTTGCTGCCGAGAGCAAAGACGGCCGCTACCTGCCCAGGCACATGGTGTCAGACGCTGACGTCCTCATGTACATGGAGACCGACAAGCTTGTCCAGGGCAGCGCAGTGGGCGACAAGTCAGACGGCCTCGCCAAGCATAGCAGTACCAAGAAATGCCAGTCCTCCCACTCCCTTCCAGCTACTCTgagccacagtctgtcccatCAGCAGGAGAGCGGCCGGCACGAGGCCAAGTACGAGACCGGAGACGACAAGCTGGCCGGGGACGGCAGCAGGTCTAAACACTGGCAGCAGGAGTATCCCAACAAGTGGAACTTCCAGCCACGTTACGAGTGCCCGGATTCTGACCACCACCAGAGTAAAGCGAAACCGCCAAGCAGCTACCACAGTACAGAGGACCAGGCATCCGCGCCCAGGGAACAGCAGGCCCGCTCCAAACTGGAGCGCTCCCACAGCGTCCGGGAGCAGCAGCACTACAGCCAGGGCAACCCCGACCTGGACAGGGACTTCTCATATCAGAAACACGGCACAAAGACAGTGCTGTCCCACTACGATAACTTGGACGATTACCACCCAGTACCTCAGCCTCAGGCCCCTGTTCAAAAACGTGGAGGCTCCGGCTCCTATCCCGGCCCTGGGTTCACAGTGAGCCACAGCAACAGAGCGTACTCCACAGCACTGGGCCAGGGAGCCTTCATCCAGACTGACATGGCCATGCAGAGGCCAGAGACAGAGATACGTACAGAATGAAGCATTTAggagggtggggtgggggggggacggACGTGTGAAATTATCTTTAGCTGTGTAGAAGACAGACTCTATTGCGCTACGGTCACAGCCTCTGCAGGACAGTGGACTGTCGTATCACCAATATTTTTGCTCCTCTGTATTTTTAATGAATTGTAAAGAAAATTGTAAGACTTTTTACAGAAAAGTCCTGAATGTACCTGAAATTATTGTCCAAGAGGTCATATTATTGTGATTGATTGAGACAATAGCCAGTCATAAATGTATATGATATGAAAAATGTAAGGTACTTTTAACAGggacacaaaaatgtaaaatatatttacatatatatatgaatagaaTTACTAGTAAAAAGGGATTTTagttggaattttttttttttttaggtgtggCGCTGGGTTTGAGCATCAACTGGGATTAAGCTTTGCATTTTAgaaatgcatgcacacactatCTCTTACAGAACAGTTCTGTGTAGTTCAGGATCCATTGCGTTCTTTCTGGATGTTACAGCACAAGTTATTGGAGGAAAATATATTTAGGTCATCGCTAACTCCCTCTGCTTAGATGTACACAAGTAGGCGGGGCGGTGTGTCCGCGTTGGTCTTGAAGAATCCGACTGGGTGTGAGCTTTGATAAGGAGCTGCAATGGGTTACTTTCAGATAATATAGTGGTTATCAAtgtcttattttctgtgtgacTGTGCCATTTTTATGTAACTTTGCTATAAACAGATTTCAATCACTTCTAATGGAATGTTTTGGTACTTGttatgtttgtctttttttggaaGAGGGACCAAACGACTTGGCGCTGTTGTTGCACATAACCAGATGTAGAGGGGAAGATGGATGAATGCCCGTTGTACCTTTTTTAAGTATGTGtaagaggttgttttttttaatttcgtTTTTTTTCATCGCATTCTCGGTACTTTTCATGAACTGGACTGACTGAATAAAGCTGAAAACAATGTCCTCTCAAACAACGTGGTGGAAAACATGTTGCCGCTGCTTTGTGGGGAAAACAACTTGGTGATGAGCCTTAAATTTAGTTCCAACAGACCATATTTTGTTTACGTCACCATTGTCCTAATGCACACACATTGGGATATCTAGATTTAAGATCACCTTTGATGATTTTTGATTGTTCAGGGTTGACAGGTGAGGTGACCCACTGGGGTTACTGGCTCTGAATTTAAAACAATGGGGGAgggaaaaggtttttttttgttttgttttttaaaagatatCTGGGGCCATTTATTTTCAGGCTGGAAATTGATGTAAATTCATGTGGTATTATACGACATGCCCTTTTGGTTCATCATACTGTATGGATTACAATATGTTTCAAATATGTCTAAATCCAGGTTGTACTCTGTAACTGTTTGACTTCTATCGCTTGCAGGTTTTGCTCCTCTTGCCTTATCTAAAGCCTCTACCTTTTCAGATGGGGAACTGAAGTAAGGCACTGTGTAATTGAATGTGAAaacactcctctctctctcaaactaGAGGTGATCTGCAGTTAGatatgaaattaataaaacTGTTCAGGAATAGCTATAA

Function

GO: NA

KEGG:

id description
K19839 RGA1_2; Rho-type GTPase-activating protein 1/2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU231072 lncRNA downstream 10801 31902012 ~ 31906986 (-) True G170425
TU231071 lncRNA downstream 16643 31900086 ~ 31901144 (-) True G170424
TU230966 lncRNA downstream 172103 31744851 ~ 31745684 (-) True G170332
TU230927 lncRNA downstream 327774 31579840 ~ 31590013 (-) False LOC120544288
XR_005636477.1 lncRNA downstream 341522 31566368 ~ 31576265 (-) True LOC120544288
TU231094 lncRNA upstream 43831 32011473 ~ 32011840 (-) True G170444
TU231096 lncRNA upstream 53705 32021347 ~ 32021731 (-) True G170446
TU231082 lncRNA upstream 107753 32075395 ~ 32078473 (-) True G170433
TU231101 lncRNA upstream 193006 32160648 ~ 32160862 (-) True G170451
TU231116 lncRNA upstream 257608 32225250 ~ 32225792 (-) True G170465
XM_039777392.1 mRNA downstream 4336 31909425 ~ 31913451 (-) True h3f3c
XM_039778213.1 mRNA downstream 29270 31874406 ~ 31888517 (-) True kptn
XM_039778245.1 mRNA downstream 44377 31850106 ~ 31873410 (-) False nova1
XM_039778246.1 mRNA downstream 49873 31850106 ~ 31867914 (-) True nova1
XM_039778156.1 mRNA downstream 85077 31821224 ~ 31832710 (-) True capns1a
XM_039777389.1 mRNA upstream 3238 31970880 ~ 32064710 (-) True LOC120543954
XM_039777390.1 mRNA upstream 3238 31970880 ~ 32059977 (-) False LOC120543954
XM_039777391.1 mRNA upstream 3238 31970880 ~ 32013019 (-) False LOC120543954
XM_039777394.1 mRNA upstream 111334 32078976 ~ 32090441 (-) False vps26bl
XM_039777393.1 mRNA upstream 111334 32078976 ~ 32090441 (-) True vps26bl
TU230664 other downstream 959289 30957501 ~ 30958498 (-) True G170098
TU230602 other downstream 1066774 30849319 ~ 30851013 (-) False LOC120543892
TU230603 other downstream 1087844 30829067 ~ 30829943 (-) False LOC120543890
TU230595 other downstream 1178520 30738055 ~ 30739267 (-) False LOC120543890
TU230450 other downstream 1503094 30411251 ~ 30414693 (-) False si:ch73-1a9.3
TU231114 other upstream 234067 32201709 ~ 32202206 (-) True G170463
TU231185 other upstream 475644 32443286 ~ 32491305 (-) True LOC120543978
XR_005636561.1 other upstream 2311660 34279302 ~ 34279394 (-) True LOC120544758
XR_005636560.1 other upstream 2313283 34280925 ~ 34281017 (-) True LOC120544757
TU231512 other upstream 2341352 34308994 ~ 34309714 (-) True G170802

Expression Profile