RNA id: TU243656


Basic Information

Item Value
RNA id TU243656
length 232
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G179898
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 33094425 ~ 33095752 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgtctgtctgtctgtctgtctgtctgtctgcacctgCAGAGGAACAGACGACAGGTTAGAGTAGGAcaagtctctgtctgtctgtctgtctgtctgcacctgCAGAGGAACAGACGACAGGTTAGAGTAGGAcaagtctctgtctgtctgtctgtctgtctgcacctgCAGAGGAACAGACGACAGGTTAGAGTAGGAcaagtctctgtctgtctgtctgtctgtctgcctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU243628 lncRNA upstream 75973 33017455 ~ 33018452 (+) True G179876
TU243629 lncRNA upstream 76455 33017455 ~ 33017970 (+) False G179876
TU243624 lncRNA upstream 83169 33009719 ~ 33011256 (+) True G179873
TU243621 lncRNA upstream 86072 33003214 ~ 33008353 (+) True G179870
TU243612 lncRNA upstream 156668 32937042 ~ 32937757 (+) True G179863
TU243615 lncRNA downstream 8177 33103929 ~ 33107192 (+) False mrps18c
TU243672 lncRNA downstream 18939 33114691 ~ 33187628 (+) False G179903
TU243675 lncRNA downstream 18939 33114691 ~ 33117556 (+) False G179903
TU243669 lncRNA downstream 20013 33115765 ~ 33117759 (+) True G179903
TU243671 lncRNA downstream 20013 33115765 ~ 33117759 (+) False G179903
XM_039780257.1 mRNA upstream 18286 33073364 ~ 33076139 (+) True LOC120545707
XM_039780253.1 mRNA upstream 39541 33052912 ~ 33054884 (+) True LOC120545701
XM_039780251.1 mRNA upstream 58193 33033850 ~ 33036232 (+) True LOC120545698
XM_039780252.1 mRNA upstream 64108 33027615 ~ 33030317 (+) True LOC120545699
XM_039779076.1 mRNA upstream 110374 32971140 ~ 32984051 (+) False LOC120545086
XM_039779079.1 mRNA downstream 8139 33103891 ~ 33109471 (+) True mrps18c
XM_039780270.1 mRNA downstream 94274 33190026 ~ 33197835 (+) False abraxas1
XM_039780296.1 mRNA downstream 175484 33271236 ~ 33273527 (+) True LOC120545739
XM_039780297.1 mRNA downstream 225615 33321367 ~ 33325749 (+) True LOC120545741
XM_039780298.1 mRNA downstream 225616 33321368 ~ 33325749 (+) False LOC120545741
TU243616 other upstream 110373 32964961 ~ 32984052 (+) True LOC120545086
TU243411 other upstream 645610 32442055 ~ 32448815 (+) True LOC120545732
TU243294 other upstream 994883 32079177 ~ 32099542 (+) True G179655
TU243673 other downstream 20013 33115765 ~ 33187628 (+) False G179903
TU243664 other downstream 94269 33190021 ~ 33197836 (+) False abraxas1
TU243663 other downstream 94367 33190119 ~ 33197836 (+) False abraxas1
TU243665 other downstream 94367 33190119 ~ 33197957 (+) True abraxas1
TU243666 other downstream 94367 33190119 ~ 33197836 (+) False abraxas1

Expression Profile