RNA id: TU243629


Basic Information

Item Value
RNA id TU243629
length 309
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G179876
representative False

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 33017455 ~ 33018452 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacagagacagacacacagacagacagacagacagacagacagacagacacacacacacacacacacacacacagacagagacagacacacacacacagacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacactcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagagagacacacacacacacacagagacacacacacacacacacacacacacagagacagacacacacacacaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU243624 lncRNA upstream 6199 33009719 ~ 33011256 (+) True G179873
TU243621 lncRNA upstream 9102 33003214 ~ 33008353 (+) True G179870
TU243612 lncRNA upstream 79698 32937042 ~ 32937757 (+) True G179863
TU243598 lncRNA upstream 92213 32883780 ~ 32925242 (+) True G179853
TU243655 lncRNA downstream 76093 33094063 ~ 33096602 (+) True G179897
TU243656 lncRNA downstream 76455 33094425 ~ 33095752 (+) True G179898
TU243615 lncRNA downstream 85959 33103929 ~ 33107192 (+) False mrps18c
TU243672 lncRNA downstream 96721 33114691 ~ 33187628 (+) False G179903
TU243675 lncRNA downstream 96721 33114691 ~ 33117556 (+) False G179903
XM_039779076.1 mRNA upstream 33404 32971140 ~ 32984051 (+) False LOC120545086
XM_039780279.1 mRNA upstream 68031 32940410 ~ 32949424 (+) True psmb6
XM_039780250.1 mRNA upstream 212126 32803106 ~ 32805329 (+) True LOC120545697
XM_039780254.1 mRNA upstream 257381 32758214 ~ 32760074 (+) True LOC120545704
XM_039779072.1 mRNA upstream 271576 32744536 ~ 32745879 (+) True LOC120545081
XM_039780252.1 mRNA downstream 9645 33027615 ~ 33030317 (+) True LOC120545699
XM_039780251.1 mRNA downstream 15880 33033850 ~ 33036232 (+) True LOC120545698
XM_039780253.1 mRNA downstream 34942 33052912 ~ 33054884 (+) True LOC120545701
XM_039780257.1 mRNA downstream 55394 33073364 ~ 33076139 (+) True LOC120545707
XM_039779079.1 mRNA downstream 85921 33103891 ~ 33109471 (+) True mrps18c
TU243616 other upstream 33403 32964961 ~ 32984052 (+) True LOC120545086
TU243411 other upstream 568640 32442055 ~ 32448815 (+) True LOC120545732
TU243294 other upstream 917913 32079177 ~ 32099542 (+) True G179655
TU243673 other downstream 97795 33115765 ~ 33187628 (+) False G179903
TU243664 other downstream 172051 33190021 ~ 33197836 (+) False abraxas1
TU243663 other downstream 172149 33190119 ~ 33197836 (+) False abraxas1
TU243665 other downstream 172149 33190119 ~ 33197957 (+) True abraxas1
TU243666 other downstream 172149 33190119 ~ 33197836 (+) False abraxas1

Expression Profile