Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039780279.1 |
| length | 894 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 7 |
| gene id | psmb6 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053128.1 |
| NCBI id | CM020925.1 |
| chromosome length | 37416781 |
| location | 32940410 ~ 32949424 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0051603 | proteolysis involved in cellular protein catabolic process | biological_process |
| GO:0005839 | proteasome core complex | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004298 | threonine-type endopeptidase activity | molecular_function |
| id | description |
|---|---|
| K02738 | PSMB6; 20S proteasome subunit beta 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU243612 | lncRNA | upstream | 2653 | 32937042 ~ 32937757 (+) | True | G179863 |
| TU243598 | lncRNA | upstream | 15168 | 32883780 ~ 32925242 (+) | True | G179853 |
| TU243597 | lncRNA | upstream | 15168 | 32902301 ~ 32925242 (+) | False | G179853 |
| TU243577 | lncRNA | upstream | 34348 | 32731345 ~ 32906062 (+) | False | G179836 |
| TU243590 | lncRNA | upstream | 122026 | 32813068 ~ 32818384 (+) | True | G179846 |
| TU243621 | lncRNA | downstream | 53790 | 33003214 ~ 33008353 (+) | True | G179870 |
| TU243624 | lncRNA | downstream | 60295 | 33009719 ~ 33011256 (+) | True | G179873 |
| TU243628 | lncRNA | downstream | 68031 | 33017455 ~ 33018452 (+) | True | G179876 |
| TU243629 | lncRNA | downstream | 68031 | 33017455 ~ 33017970 (+) | False | G179876 |
| TU243655 | lncRNA | downstream | 144639 | 33094063 ~ 33096602 (+) | True | G179897 |
| XM_039780250.1 | mRNA | upstream | 135081 | 32803106 ~ 32805329 (+) | True | LOC120545697 |
| XM_039780254.1 | mRNA | upstream | 180336 | 32758214 ~ 32760074 (+) | True | LOC120545704 |
| XM_039779072.1 | mRNA | upstream | 194531 | 32744536 ~ 32745879 (+) | True | LOC120545081 |
| XM_039780293.1 | mRNA | upstream | 495765 | 32442010 ~ 32444645 (+) | False | LOC120545732 |
| XM_039780249.1 | mRNA | upstream | 562342 | 32332873 ~ 32378068 (+) | True | fgfr1b |
| XM_039779076.1 | mRNA | downstream | 21716 | 32971140 ~ 32984051 (+) | False | LOC120545086 |
| XM_039780252.1 | mRNA | downstream | 78191 | 33027615 ~ 33030317 (+) | True | LOC120545699 |
| XM_039780251.1 | mRNA | downstream | 84426 | 33033850 ~ 33036232 (+) | True | LOC120545698 |
| XM_039780253.1 | mRNA | downstream | 103488 | 33052912 ~ 33054884 (+) | True | LOC120545701 |
| XM_039780257.1 | mRNA | downstream | 123940 | 33073364 ~ 33076139 (+) | True | LOC120545707 |
| TU243411 | other | upstream | 491595 | 32442055 ~ 32448815 (+) | True | LOC120545732 |
| TU243294 | other | upstream | 840868 | 32079177 ~ 32099542 (+) | True | G179655 |
| TU243298 | other | upstream | 840868 | 32089428 ~ 32099542 (+) | False | G179655 |
| TU243292 | other | upstream | 848279 | 32089428 ~ 32092131 (+) | False | G179655 |
| TU242927 | other | upstream | 1460316 | 31387747 ~ 31480094 (+) | True | G179407 |
| TU243616 | other | downstream | 15537 | 32964961 ~ 32984052 (+) | True | LOC120545086 |
| TU243673 | other | downstream | 166341 | 33115765 ~ 33187628 (+) | False | G179903 |
| TU243664 | other | downstream | 240597 | 33190021 ~ 33197836 (+) | False | abraxas1 |
| TU243663 | other | downstream | 240695 | 33190119 ~ 33197836 (+) | False | abraxas1 |
| TU243665 | other | downstream | 240695 | 33190119 ~ 33197957 (+) | True | abraxas1 |
