RNA id: TU243298


Basic Information

Item Value
RNA id TU243298
length 1589
RNA type TUCP
GC content 0.43
exon number 5
gene id G179655
representative False

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 32079177 ~ 32099542 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTCATCAGCGTGCGACTAACTTCTGGTGACAGGAAAGAAGAAGGAAAGATGGCTGCAAGGTTACTGCTCCGCTCGGCTGTTCGAGCCGCGACAACCTGCCGGGCTGCCCCGGTCCCGGCTCTGACCCGCGGCATGGCGGCTGGAGGGATCCCCACTGACGAGGAGCAGGCCACCGGCCTGAAGCCTAAAGAGTACGCTGGCTCCAAGGCCGATCCTCACCTCGTTCCCTCCATCACTAACAAGAGGATCGTGGGATGTGTCTgtgaAGAAGACAACACGGCCGTGGTCTGGTTCTGGCTCCACCAGGGTGACGCCCAGCGCTGCCCCTCCTGTGGGTCCCACTACAAACTGGTGGCCCACCAACTCCCCCActaacccccccacacacacacctctcttaACATAGACATAGGTCTCTAATAGCATATGTTACTAGATACATATGTCTCTAATAACATGTTACTAGATACATATGTCTCTAATAACATGTTACTAGATACATATGTCTCTAATAACATATGTCAATAATAACATGTTACTAGATACATATGTCTCTAATAACATATGTCTCTAATAACATGTTACTGGAGACATATGTCTCTAATAACACATGTTACTAGATACATATGTCTCTAATAACACGTTACTAGATACATATGTCTCTAATAACACATGTTACTAGATACATATGTCTCTAATAACACATGTTACTAGATACAAATGTCAATATAGACATATGTTACTAGAGACATATGTCTCTAATAACATATGTCTCTAACAACATGTTACTAGATACATGTCTCTAATAACATATGTTACTAGAGACATATGTTACTAGAGACCTATGTCATTAATAACATATGTTATTAGAGACATATGTTACTAGAGACCTATGTCTCTAATAACATGTTACTAGAGACATACGTTGTTATAATATAGACATGTATCATGCAGCTGAAATATTCCTCTTAGCTTCAGAACGGGGAGAAGAAAGGTCAGATAGTCTCCAGGAAGTGTATTTATCCTGGAACATTTTATTTCCTGGAGTTGTGAGCCGTCGTCTGATTGGTCTCTGACTCGTTCTgtctagagatgttccgataccattTCTTTCCTTCCCAATATGGCCGATACCGAGCACCGATCAGATACCCATGTGTGTCATATTATCTACTatctactatctctgtatggatgtgatgcGACCGCTATCATTGTTGTTTAACTCTTTGGGGAAAGCCATTGTCATAACTGGGAAAAGAACGTGACGTGGTATCGgttcggtgcataaactccagcaCTCGCTGATCCGGTACCAGAGTTTTAGGCAGCATCGGAGGCTTTTAGATaccggtatcggaacatctcgtTCTGTCTCGTACTTGATAGACCTGCTGACCTCATCAGTCTTTGCTTTACGTGTCGGCGCAGGGATCACATGTGGTTTGGGACACAACTGTTTTCTTCAAACATTTCCATTCATCGTTCAGTTTACATTCACACACTCGTGTACTGTATTGTAATGTTACACTCTGGTCCACCTCACTCCTTTGACTCAACCAATAAAATCCTCATACTTTATATTTCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU243287 lncRNA upstream 11257 32072817 ~ 32078171 (+) True G179652
TU243286 lncRNA upstream 11418 32067780 ~ 32078010 (+) False LOC120545711
TU243288 lncRNA upstream 15708 32073168 ~ 32073720 (+) True G179653
TU243278 lncRNA upstream 72737 32016382 ~ 32016691 (+) True G179644
TU243271 lncRNA upstream 80293 32008437 ~ 32009135 (+) True G179637
TU243360 lncRNA downstream 118657 32218199 ~ 32218689 (+) True G179699
TU243346 lncRNA downstream 150531 32250073 ~ 32254791 (+) True G179687
TU243368 lncRNA downstream 172881 32272423 ~ 32332287 (+) True G179707
TU243370 lncRNA downstream 175926 32275468 ~ 32275763 (+) True G179709
TU243387 lncRNA downstream 184583 32284125 ~ 32284942 (+) True G179713
XM_039780291.1 mRNA upstream 3513 32079161 ~ 32085915 (+) True LOC120545730
XM_039780264.1 mRNA upstream 11418 32059925 ~ 32078010 (+) True LOC120545711
XM_039779069.1 mRNA upstream 119101 31969324 ~ 31970327 (+) True LOC120545077
XM_039780243.1 mRNA upstream 157173 31928596 ~ 31932255 (+) True LOC120545689
XM_039780242.1 mRNA upstream 166978 31919840 ~ 31922450 (+) True LOC120545688
XM_039780272.1 mRNA downstream 114190 32213732 ~ 32226606 (+) True npy8ar
XM_039780275.1 mRNA downstream 176799 32276341 ~ 32291928 (+) False march5l
XM_039780277.1 mRNA downstream 176799 32276341 ~ 32291928 (+) False march5l
XM_039780278.1 mRNA downstream 176799 32276341 ~ 32291928 (+) False march5l
XM_039780276.1 mRNA downstream 176968 32276510 ~ 32291928 (+) True march5l
TU242927 other upstream 609334 31387747 ~ 31480094 (+) True G179407
XR_005636691.1 other upstream 1778534 30264383 ~ 30310894 (+) True zmiz2
TU242148 other upstream 2067211 30021319 ~ 30022217 (+) True G178881
TU242149 other upstream 2067211 30021319 ~ 30022217 (+) False G178881
TU242091 other upstream 2294114 29794144 ~ 29795314 (+) False LOC120545429
TU243411 other downstream 342513 32442055 ~ 32448815 (+) True LOC120545732
TU243616 other downstream 865419 32964961 ~ 32984052 (+) True LOC120545086
TU243673 other downstream 1016223 33115765 ~ 33187628 (+) False G179903
TU243664 other downstream 1090479 33190021 ~ 33197836 (+) False abraxas1
TU243663 other downstream 1090577 33190119 ~ 33197836 (+) False abraxas1

Expression Profile