RNA id: TU243360


Basic Information

Item Value
RNA id TU243360
length 286
lncRNA type intronic
GC content 0.53
exon number 2
gene id G179699
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 32218199 ~ 32218689 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gggtctcctctagctgtagataggtggggtctcccctagctgtagataggtgaggtctcctctagctgtagataggtgaggtctcctctagctgtagataggtggggtctcctctagctgtagataggtgaggtctcctctagctgtagataggtggggtctcccctagctgtagataggtgaggtctcctctagctgtagataggtgaggtctcctctagctgtagataggtggggtctcccctagctgtagataggtggggtctcctctagctgtagataggtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU243291 lncRNA upstream 118657 32096300 ~ 32099542 (+) False G179655
TU243287 lncRNA upstream 140028 32072817 ~ 32078171 (+) True G179652
TU243286 lncRNA upstream 140189 32067780 ~ 32078010 (+) False LOC120545711
TU243288 lncRNA upstream 144479 32073168 ~ 32073720 (+) True G179653
TU243278 lncRNA upstream 201508 32016382 ~ 32016691 (+) True G179644
TU243346 lncRNA downstream 31384 32250073 ~ 32254791 (+) True G179687
TU243368 lncRNA downstream 53734 32272423 ~ 32332287 (+) True G179707
TU243370 lncRNA downstream 56779 32275468 ~ 32275763 (+) True G179709
TU243387 lncRNA downstream 65436 32284125 ~ 32284942 (+) True G179713
TU243399 lncRNA downstream 147758 32366447 ~ 32420471 (+) True G179721
XM_039780292.1 mRNA upstream 118665 32089425 ~ 32099534 (+) True LOC120545731
XM_039780291.1 mRNA upstream 132284 32079161 ~ 32085915 (+) True LOC120545730
XM_039780264.1 mRNA upstream 140189 32059925 ~ 32078010 (+) True LOC120545711
XM_039779069.1 mRNA upstream 247872 31969324 ~ 31970327 (+) True LOC120545077
XM_039780243.1 mRNA upstream 285944 31928596 ~ 31932255 (+) True LOC120545689
XM_039780275.1 mRNA downstream 57652 32276341 ~ 32291928 (+) False march5l
XM_039780277.1 mRNA downstream 57652 32276341 ~ 32291928 (+) False march5l
XM_039780278.1 mRNA downstream 57652 32276341 ~ 32291928 (+) False march5l
XM_039780276.1 mRNA downstream 57821 32276510 ~ 32291928 (+) True march5l
XM_039780268.1 mRNA downstream 77159 32295848 ~ 32305583 (+) True kctd9b
TU243294 other upstream 118657 32079177 ~ 32099542 (+) True G179655
TU243298 other upstream 118657 32089428 ~ 32099542 (+) False G179655
TU243292 other upstream 126068 32089428 ~ 32092131 (+) False G179655
TU242927 other upstream 738105 31387747 ~ 31480094 (+) True G179407
XR_005636691.1 other upstream 1907305 30264383 ~ 30310894 (+) True zmiz2
TU243411 other downstream 223366 32442055 ~ 32448815 (+) True LOC120545732
TU243616 other downstream 746272 32964961 ~ 32984052 (+) True LOC120545086
TU243673 other downstream 897076 33115765 ~ 33187628 (+) False G179903
TU243664 other downstream 971332 33190021 ~ 33197836 (+) False abraxas1
TU243663 other downstream 971430 33190119 ~ 33197836 (+) False abraxas1

Expression Profile