RNA id: TU258748


Basic Information

Item Value
RNA id TU258748
length 237
lncRNA type read_through
GC content 0.49
exon number 3
gene id G190701
representative True

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 1298106 ~ 1387685 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtttgagtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagtgtgtgtgtctgtgtgtgtctctatgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU258705 lncRNA upstream 9118 1272589 ~ 1288988 (+) True G190661
TU258715 lncRNA upstream 21408 1258447 ~ 1276698 (+) True G190671
TU258725 lncRNA upstream 28179 1257556 ~ 1269927 (+) True G190681
TU258741 lncRNA upstream 66901 1229622 ~ 1231205 (+) True G190694
TU258733 lncRNA upstream 163562 1077816 ~ 1134544 (+) True G190688
TU258712 lncRNA downstream 5703 1393388 ~ 1408170 (+) True G190668
TU258783 lncRNA downstream 21344 1409029 ~ 1452587 (+) True G190730
TU258717 lncRNA downstream 89657 1477342 ~ 1484441 (+) True G190673
TU258722 lncRNA downstream 96065 1483750 ~ 1520331 (+) True G190678
TU258799 lncRNA downstream 101714 1489399 ~ 1499509 (+) True G190738
XM_039784681.1 mRNA upstream 18521 1268100 ~ 1279585 (+) True LOC120548417
XM_039784680.1 mRNA upstream 27577 1261525 ~ 1270529 (+) False LOC120548416
XM_039784677.1 mRNA upstream 69897 1227292 ~ 1228209 (+) True LOC120548414
XM_039783037.1 mRNA upstream 111341 1181539 ~ 1186765 (+) True LOC120547564
XM_039784673.1 mRNA upstream 137196 1144409 ~ 1160910 (+) True LOC120548410
XM_039784491.1 mRNA downstream 75552 1463237 ~ 1469251 (+) True LOC120548322
XM_039783195.1 mRNA downstream 104300 1491985 ~ 1499227 (+) True LOC120547663
XM_039784294.1 mRNA downstream 241792 1629477 ~ 1669861 (+) True LOC120548209
XM_039784686.1 mRNA downstream 362219 1749904 ~ 1751977 (+) True LOC120548423
XM_039784012.1 mRNA downstream 461628 1849313 ~ 1855707 (+) True LOC120548061
TU258747 other upstream 11279 1286410 ~ 1286827 (+) True G190700
TU258691 other upstream 26200 1144425 ~ 1271906 (+) False LOC120548410
TU258701 other upstream 27693 1268136 ~ 1270413 (+) True G190658
TU258551 other upstream 32023 1262816 ~ 1266083 (+) True LOC120548416
TU258684 other upstream 124688 1144425 ~ 1173418 (+) False LOC120548410
TU258719 other downstream 15838 1403523 ~ 1567121 (+) True G190675
TU258797 other downstream 104321 1492006 ~ 1499112 (+) False LOC120547663
TU258792 other downstream 147612 1535297 ~ 1539838 (+) False G190735
TU258825 other downstream 155171 1542856 ~ 1543292 (+) True G190757
TU258826 other downstream 194149 1581834 ~ 1615546 (+) True G190758

Expression Profile