RNA id: TCONS_00071739


Basic Information

Item Value
RNA id TCONS_00071739
length 989
RNA type mRNA
GC content 0.46
exon number 6
gene id XLOC_036741
representative False

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 48768873 ~ 48770603 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tacaGGTAACATCTTCCAGGAGTATAAAGTCTGTTACCTATTAGGCAGTGGATCGAATGGAGCTGTCTATTATGGAATTCGTCTGTCGGATTACCGAAAGGTGGCAATCAAATACGTCAAGAAGACAACTACAATGAGTAGGATCAAGATTGAAGCATTACAGCAGACCGTTCCACAAGAAGTCGGTTTGATGTATTTGATGAGCAGGGGCCCTAACGTTCCTCAAATAATCCAGCTGCTGGATTGGTACGAGACACCCGACAAGTACATACTGGTGCTGGAGTGTCCCAAATCATGTATGGACATGCACCAGTTTGTAATGCGGCATGGGAACAAAATCAGCGAGGCGAAAGCGCGACTGGTGATGCACCAGGTGGTCACTGCTGCCAGAATATGCTGCGAAAGGGGCGTCTACCACAGCAGCATCAAGCTGGAGAACCTGCTTATCAACCCTCACACCTTTCAAGTCAAACTGATAGACTTTGGCACTGGAAGACCCATGAAAAACACTGGCTATTCAACATACTGGGGCTCAAAAGCTTGTGTTCCCCCGGAGTTTTATCGTCATGGAAGAAAGTTCTACGCCAAGCATGCAATCGCGTATTCTTTAGGAGTACTGTTGTTCAAGATGCTGTGTGGACGATTCCCTAAAGAAGAGCTCAACAAGATTGTCAAAAGAACCTGGCAGCCTGAAGAGCTATCCAACGAATCCATAGATCTGATCTGTTCCTGTCTGCAAAGTGATCCAGACAAGCGGATGCCTTTTGATGAGATCCTTCTTCATAAATGGTTCCAGGTCTTGATCCTGAAGCCAAGCGGAAAGAAGAAACAATTGAATAACAGCACAGCTGAAGAAGATCCTGGGACATGAAGAAGATTACACCAAGCTCCTTCTCTTCATCCAGCTACTAACACCAAACTCCTCCTCTTCATCGAGCAACCTAACACCAAACTCCTCCTCTTCATCGAGCAACCTAACACCAAGCTCC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000159712

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00071726 lncRNA downstream 101016 48661151 ~ 48668082 (-) False XLOC_036736
TCONS_00072529 lncRNA downstream 221006 48546053 ~ 48548092 (-) True XLOC_036735
TCONS_00072087 lncRNA downstream 599762 48168900 ~ 48169336 (-) True XLOC_036734
TCONS_00072528 lncRNA downstream 610345 48092795 ~ 48158753 (-) False XLOC_036733
TCONS_00072088 lncRNA upstream 24855 48795458 ~ 48798032 (-) True XLOC_036743
TCONS_00072530 lncRNA upstream 273141 49043744 ~ 49065039 (-) True XLOC_036745
TCONS_00071776 lncRNA upstream 975629 49746232 ~ 49749612 (-) False XLOC_036760
TCONS_00071777 lncRNA upstream 977808 49748411 ~ 49749381 (-) False XLOC_036760
TCONS_00071778 lncRNA upstream 981663 49752266 ~ 49755968 (-) False XLOC_036760
TCONS_00071737 mRNA downstream 12897 48754895 ~ 48756201 (-) True XLOC_036740
TCONS_00071736 mRNA downstream 27992 48740223 ~ 48741106 (-) True XLOC_036739
TCONS_00071735 mRNA downstream 28145 48739990 ~ 48740953 (-) False XLOC_036739
TCONS_00071734 mRNA downstream 64410 48703362 ~ 48704688 (-) True XLOC_036738
TCONS_00071733 mRNA downstream 64787 48703320 ~ 48704311 (-) False XLOC_036738
TCONS_00071742 mRNA upstream 45479 48816082 ~ 48847772 (-) True XLOC_036744
TCONS_00071745 mRNA upstream 399167 49169770 ~ 49172485 (-) False XLOC_036747
TCONS_00071746 mRNA upstream 399422 49170025 ~ 49172418 (-) True XLOC_036747
TCONS_00071747 mRNA upstream 402528 49173131 ~ 49201258 (-) False XLOC_036748
TCONS_00071748 mRNA upstream 420609 49191212 ~ 49201258 (-) True XLOC_036748
TCONS_00071727 other downstream 99971 48667290 ~ 48669127 (-) True XLOC_036736
TCONS_00071722 other downstream 945780 47810764 ~ 47823318 (-) True XLOC_036731
TCONS_00071716 other downstream 1263097 47505885 ~ 47506001 (-) True XLOC_036730
TCONS_00071714 other downstream 1493688 47275296 ~ 47275410 (-) True XLOC_036727
TCONS_00071682 other downstream 2872272 45883765 ~ 45896826 (-) True XLOC_036705
TCONS_00071741 other upstream 8358 48778961 ~ 48790587 (-) True XLOC_036742
TCONS_00071743 other upstream 379301 49149904 ~ 49152475 (-) True XLOC_036746
TCONS_00071744 other upstream 399165 49169768 ~ 49172500 (-) False XLOC_036747
TCONS_00071775 other upstream 975629 49746232 ~ 49755899 (-) False XLOC_036760
TCONS_00071797 other upstream 1747179 50517782 ~ 50517903 (-) True XLOC_036773

Expression Profile

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