Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00073031 |
| length | 680 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 3 |
| gene id | XLOC_037100 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 22003942 ~ 22004833 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0002088 | lens development in camera-type eye | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-081104-427 | Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Human ortholog(s) of this gene implicated in cataract; cataract 2 multiple types; and cataract 39 multiple types. Orthologous to human CRYGB (crystallin gamma B) and CRYGC (crystallin gamma C). |
| ensembl_id | ENSDART00000091013 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00073027 | lncRNA | upstream | 10051 | 21993188 ~ 21993891 (+) | True | XLOC_037097 |
| TCONS_00073017 | lncRNA | upstream | 174198 | 21826734 ~ 21829744 (+) | True | XLOC_037092 |
| TCONS_00073011 | lncRNA | upstream | 200982 | 21802075 ~ 21802960 (+) | True | XLOC_037090 |
| TCONS_00075100 | lncRNA | upstream | 238207 | 21762019 ~ 21765735 (+) | True | XLOC_037089 |
| TCONS_00074895 | lncRNA | upstream | 240973 | 21761696 ~ 21762969 (+) | False | XLOC_037089 |
| TCONS_00075101 | lncRNA | downstream | 307900 | 22312733 ~ 22313617 (+) | False | XLOC_037104 |
| TCONS_00075102 | lncRNA | downstream | 308062 | 22312895 ~ 22313617 (+) | False | XLOC_037104 |
| TCONS_00075103 | lncRNA | downstream | 308096 | 22312929 ~ 22313617 (+) | True | XLOC_037104 |
| TCONS_00073038 | lncRNA | downstream | 355129 | 22359962 ~ 22360742 (+) | True | XLOC_037106 |
| TCONS_00074896 | lncRNA | downstream | 637553 | 22642386 ~ 22642685 (+) | True | XLOC_037110 |
| TCONS_00073030 | mRNA | upstream | 2164 | 22000812 ~ 22001778 (+) | True | XLOC_037099 |
| TCONS_00073029 | mRNA | upstream | 6793 | 21996461 ~ 21997149 (+) | True | XLOC_037098 |
| TCONS_00073028 | mRNA | upstream | 6827 | 21996315 ~ 21997115 (+) | False | XLOC_037098 |
| TCONS_00073025 | mRNA | upstream | 9885 | 21993092 ~ 21994057 (+) | False | XLOC_037097 |
| TCONS_00073023 | mRNA | upstream | 12726 | 21990095 ~ 21991216 (+) | False | XLOC_037096 |
| TCONS_00073032 | mRNA | downstream | 7079 | 22011912 ~ 22012819 (+) | True | XLOC_037101 |
| TCONS_00073033 | mRNA | downstream | 12535 | 22017368 ~ 22018304 (+) | True | XLOC_037102 |
| TCONS_00073034 | mRNA | downstream | 75289 | 22080122 ~ 22080854 (+) | False | XLOC_037103 |
| TCONS_00073035 | mRNA | downstream | 75405 | 22080238 ~ 22080989 (+) | True | XLOC_037103 |
| TCONS_00073036 | mRNA | downstream | 346610 | 22351443 ~ 22366179 (+) | False | XLOC_037105 |
| TCONS_00073026 | other | upstream | 10027 | 21993128 ~ 21993915 (+) | False | XLOC_037097 |
| TCONS_00073021 | other | upstream | 12730 | 21990058 ~ 21991212 (+) | False | XLOC_037096 |
| TCONS_00073020 | other | upstream | 17946 | 21984109 ~ 21985996 (+) | True | XLOC_037095 |
| TCONS_00073007 | other | upstream | 291796 | 21571433 ~ 21712146 (+) | False | XLOC_037087 |
| TCONS_00073005 | other | upstream | 444157 | 21540853 ~ 21559785 (+) | False | XLOC_037087 |
| TCONS_00073045 | other | downstream | 386733 | 22391566 ~ 22447578 (+) | False | XLOC_037107 |
| TCONS_00073048 | other | downstream | 572112 | 22576945 ~ 22577059 (+) | True | XLOC_037108 |
| TCONS_00073057 | other | downstream | 653396 | 22658229 ~ 22662728 (+) | True | XLOC_037111 |
| TCONS_00073071 | other | downstream | 1001618 | 23006451 ~ 23006978 (+) | True | XLOC_037117 |
| TCONS_00073073 | other | downstream | 1041434 | 23046267 ~ 23046385 (+) | True | XLOC_037119 |
