Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU48315 |
| length | 262 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G36054 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 5054431 ~ 5054972 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48312 | lncRNA | upstream | 35795 | 5017652 ~ 5018636 (+) | True | G36051 |
| TU48305 | lncRNA | upstream | 114160 | 4937962 ~ 4940271 (+) | True | G36044 |
| TU48293 | lncRNA | upstream | 174037 | 4851254 ~ 4880394 (+) | True | G36035 |
| TU48291 | lncRNA | upstream | 204393 | 4849754 ~ 4850038 (+) | True | G36034 |
| TU48283 | lncRNA | upstream | 206211 | 4807691 ~ 4848220 (+) | True | G36026 |
| TU48384 | lncRNA | downstream | 179411 | 5234383 ~ 5234591 (+) | True | G36105 |
| TU48385 | lncRNA | downstream | 221481 | 5276453 ~ 5278682 (+) | True | G36106 |
| TU48400 | lncRNA | downstream | 383185 | 5438157 ~ 5440609 (+) | True | G36114 |
| TU48455 | lncRNA | downstream | 639421 | 5694393 ~ 5694946 (+) | True | G36145 |
| TU48487 | lncRNA | downstream | 965881 | 6020853 ~ 6021123 (+) | True | G36170 |
| XM_039796916.1 | mRNA | upstream | 10954 | 4956351 ~ 5043477 (+) | True | LOC120556975 |
| XM_039796920.1 | mRNA | upstream | 10954 | 4956351 ~ 5043477 (+) | False | LOC120556975 |
| XM_039796921.1 | mRNA | upstream | 10954 | 4956351 ~ 5043477 (+) | False | LOC120556975 |
| XM_039796922.1 | mRNA | upstream | 10954 | 4956351 ~ 5043477 (+) | False | LOC120556975 |
| XM_039796923.1 | mRNA | upstream | 10954 | 4956351 ~ 5043477 (+) | False | LOC120556975 |
| XM_039798207.1 | mRNA | downstream | 555038 | 5610010 ~ 5665053 (+) | True | cntn3b |
| XM_039798206.1 | mRNA | downstream | 561783 | 5616755 ~ 5665053 (+) | False | cntn3b |
| XM_039798002.1 | mRNA | downstream | 738760 | 5793732 ~ 5905163 (+) | True | pdzrn3b |
| XM_039798003.1 | mRNA | downstream | 738760 | 5793732 ~ 5905163 (+) | False | pdzrn3b |
| XM_039798004.1 | mRNA | downstream | 822492 | 5877464 ~ 5905163 (+) | False | pdzrn3b |
| XR_005638977.1 | other | upstream | 120267 | 4911700 ~ 4934164 (+) | True | cdk5rap1 |
| XR_005638978.1 | other | upstream | 120267 | 4911700 ~ 4934164 (+) | False | cdk5rap1 |
| TU48130 | other | upstream | 468956 | 4556704 ~ 4585475 (+) | False | G35921 |
| TU48469 | other | downstream | 865952 | 5920924 ~ 5924400 (+) | True | G36156 |
| TU48489 | other | downstream | 980128 | 6035100 ~ 6052769 (+) | False | rybpb |
| TU48651 | other | downstream | 1580330 | 6635302 ~ 6638387 (+) | False | setmar |
| TU48863 | other | downstream | 2187237 | 7242209 ~ 7258950 (+) | False | G36458 |
| TU49260 | other | downstream | 3172790 | 8227762 ~ 8228720 (+) | True | G36744 |
