Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034313518.1 |
| length | 1043 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 9 |
| gene id | snapc1a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 7539918 ~ 7546180 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004580144.1 | lncRNA | downstream | 278320 | 7259935 ~ 7262282 (-) | True | LOC113545333 |
| XR_003404599.2 | lncRNA | downstream | 278466 | 7259917 ~ 7262136 (-) | False | LOC113545333 |
| TU344978 | lncRNA | downstream | 520918 | 7017034 ~ 7019684 (-) | True | G291198 |
| TU344979 | lncRNA | downstream | 524715 | 7014734 ~ 7015887 (-) | True | G291199 |
| TU344956 | lncRNA | downstream | 562073 | 6978327 ~ 6978529 (-) | True | G291182 |
| TU345470 | lncRNA | upstream | 130357 | 7676537 ~ 7767766 (-) | False | G291593 |
| TU345473 | lncRNA | upstream | 220442 | 7766622 ~ 7767766 (-) | True | G291593 |
| TU345525 | lncRNA | upstream | 221662 | 7767842 ~ 7768116 (-) | True | G291629 |
| TU345529 | lncRNA | upstream | 223089 | 7769269 ~ 7769478 (-) | True | G291633 |
| TU345751 | lncRNA | upstream | 577465 | 8123645 ~ 8125793 (-) | True | G291813 |
| XM_026944477.2 | mRNA | downstream | 2931 | 7522861 ~ 7537671 (-) | True | si:ch211-212g7.6 |
| XM_034313804.1 | mRNA | downstream | 19761 | 7503849 ~ 7520841 (-) | True | ppp2r5ea |
| XM_034313622.1 | mRNA | downstream | 63396 | 7388659 ~ 7477206 (-) | False | kcnh5a |
| XM_026944348.2 | mRNA | upstream | 918 | 7547098 ~ 7564044 (-) | True | hif1ab |
| XM_026944350.2 | mRNA | upstream | 918 | 7547098 ~ 7554930 (-) | False | hif1ab |
| XM_026944602.2 | mRNA | upstream | 22848 | 7569028 ~ 7597789 (-) | True | prkchb |
| XM_026944598.2 | mRNA | upstream | 118954 | 7665134 ~ 7667786 (-) | True | six6b |
| XM_026944482.2 | mRNA | upstream | 143023 | 7689203 ~ 7712877 (-) | False | ppm1ab |
| XR_004580140.1 | other | downstream | 19761 | 7505961 ~ 7520841 (-) | False | ppp2r5ea |
| TU344922 | other | downstream | 602126 | 6937468 ~ 6938476 (-) | False | xkr6b |
| trnas-uga_10 | other | downstream | 748844 | 6791677 ~ 6791758 (-) | True | trnas-uga_10 |
| XR_004580148.1 | other | downstream | 1558439 | 5965225 ~ 5982163 (-) | False | igfbp3 |
| TU344413 | other | downstream | 1707224 | 5829107 ~ 5833378 (-) | False | si:dkeyp-51f12.3 |
| XR_004580143.1 | other | upstream | 118954 | 7665134 ~ 7667786 (-) | False | six6b |
| XR_004580142.1 | other | upstream | 118954 | 7665134 ~ 7667786 (-) | False | six6b |
| TU346069 | other | upstream | 1038037 | 8584217 ~ 8598143 (-) | False | fkbp1b |
| trnae-cuc_39 | other | upstream | 1654860 | 9201040 ~ 9201111 (-) | True | trnae-cuc_39 |
| TU346830 | other | upstream | 1942038 | 9488218 ~ 9491222 (-) | True | LOC113545281 |
