Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU53934 |
| length | 207 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G45622 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 13312950 ~ 13313156 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53928 | lncRNA | downstream | 2710 | 13308094 ~ 13310240 (-) | True | G45616 |
| TU53880 | lncRNA | downstream | 62573 | 13248942 ~ 13250377 (-) | True | G45586 |
| TU53680 | lncRNA | downstream | 406475 | 12906274 ~ 12906475 (-) | True | G45422 |
| TU53642 | lncRNA | downstream | 444494 | 12866108 ~ 12868456 (-) | True | G45395 |
| TU53662 | lncRNA | downstream | 450898 | 12858974 ~ 12862052 (-) | True | G45415 |
| TU54091 | lncRNA | upstream | 117209 | 13430365 ~ 13430899 (-) | False | csgalnact2 |
| TU54100 | lncRNA | upstream | 151340 | 13464496 ~ 13464739 (-) | True | G45755 |
| XR_003404420.2 | lncRNA | upstream | 319599 | 13632755 ~ 13641524 (-) | True | LOC113543535 |
| TU54560 | lncRNA | upstream | 870612 | 14183768 ~ 14184086 (-) | True | G46183 |
| TU54707 | lncRNA | upstream | 976400 | 14289556 ~ 14291633 (-) | True | G46304 |
| XM_026942078.2 | mRNA | downstream | 20751 | 13288107 ~ 13292199 (-) | True | plaua |
| XM_026934656.2 | mRNA | downstream | 33172 | 13237216 ~ 13279778 (-) | True | vcla |
| XM_026941768.2 | mRNA | upstream | 5076 | 13318232 ~ 13323689 (-) | True | itprip |
| XM_026938699.2 | mRNA | upstream | 52969 | 13366125 ~ 13374858 (-) | False | tial1 |
| XM_026938716.2 | mRNA | upstream | 52969 | 13366125 ~ 13374857 (-) | False | tial1 |
| XM_026938707.2 | mRNA | upstream | 52969 | 13366125 ~ 13374857 (-) | False | tial1 |
| XM_026938689.2 | mRNA | upstream | 52969 | 13366125 ~ 13374857 (-) | True | tial1 |
| XR_004577863.1 | other | downstream | 281754 | 13005486 ~ 13031196 (-) | False | slka |
| trnal-cag | other | downstream | 578668 | 12734200 ~ 12734282 (-) | True | trnal-cag |
| trnae-cuc_9 | other | downstream | 644059 | 12668820 ~ 12668891 (-) | True | trnae-cuc_9 |
| trnak-cuu_2 | other | downstream | 644385 | 12668493 ~ 12668565 (-) | True | trnak-cuu_2 |
| trnak-cuu_1 | other | downstream | 673348 | 12639530 ~ 12639602 (-) | True | trnak-cuu_1 |
| XR_004577668.1 | other | upstream | 868735 | 14181891 ~ 14192243 (-) | True | ccdc85a |
| TU55100 | other | upstream | 1466709 | 14779865 ~ 14784734 (-) | False | sdhaf4 |
| TU55523 | other | upstream | 2100785 | 15413941 ~ 15416483 (-) | False | c3h10orf53 |
| XR_004577773.1 | other | upstream | 3665975 | 16979131 ~ 16982729 (-) | False | morn4 |
| XR_004577771.1 | other | upstream | 3665975 | 16979131 ~ 16982729 (-) | False | morn4 |
