Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU5030 |
| length | 285 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G4270 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 7822727 ~ 7823011 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU4959 | lncRNA | downstream | 53879 | 7768639 ~ 7768848 (-) | True | G4200 |
| TU4844 | lncRNA | downstream | 214535 | 7607455 ~ 7608192 (-) | True | G4100 |
| XR_004579108.1 | lncRNA | downstream | 294490 | 7516789 ~ 7528237 (-) | True | LOC117598440 |
| TU4704 | lncRNA | downstream | 429341 | 7393122 ~ 7393386 (-) | True | G3979 |
| TU4644 | lncRNA | downstream | 534291 | 7288195 ~ 7288436 (-) | True | G3926 |
| TU5033 | lncRNA | upstream | 3837 | 7826848 ~ 7827128 (-) | True | G4273 |
| TU5034 | lncRNA | upstream | 5505 | 7828516 ~ 7828845 (-) | True | G4274 |
| TU5011 | lncRNA | upstream | 9065 | 7832076 ~ 7836027 (-) | True | G4251 |
| TU5339 | lncRNA | upstream | 80301 | 7903312 ~ 7903540 (-) | True | G4517 |
| TU5341 | lncRNA | upstream | 82787 | 7905798 ~ 7921889 (-) | False | fxyd6l |
| XM_026914317.2 | mRNA | downstream | 85 | 7810355 ~ 7822642 (-) | False | zgc:111976 |
| XM_026914316.2 | mRNA | downstream | 88 | 7810358 ~ 7822639 (-) | True | zgc:111976 |
| XM_034307844.1 | mRNA | downstream | 668 | 7810358 ~ 7822059 (-) | False | zgc:111976 |
| XM_026913505.2 | mRNA | downstream | 18861 | 7770659 ~ 7803866 (-) | True | si:dkey-192l18.9 |
| XM_026913995.2 | mRNA | downstream | 55962 | 7758384 ~ 7766765 (-) | True | napga |
| XM_026913772.2 | mRNA | upstream | 31958 | 7854969 ~ 7897912 (-) | False | itgb1a |
| XM_026913769.2 | mRNA | upstream | 32029 | 7855040 ~ 7897912 (-) | True | itgb1a |
| XM_026914150.2 | mRNA | upstream | 82784 | 7905795 ~ 7921928 (-) | False | fxyd6l |
| XM_026914149.2 | mRNA | upstream | 82784 | 7905795 ~ 7921924 (-) | False | fxyd6l |
| XM_026914151.2 | mRNA | upstream | 83227 | 7906238 ~ 7921926 (-) | True | fxyd6l |
| trnae-cuc_2 | other | downstream | 264907 | 7557749 ~ 7557820 (-) | True | trnae-cuc_2 |
| TU4104 | other | downstream | 1432019 | 6271436 ~ 6390708 (-) | False | kcnh2b |
| TU4064 | other | downstream | 1737071 | 6069359 ~ 6085656 (-) | True | G3420 |
| XR_003402769.2 | other | downstream | 2836017 | 4983218 ~ 4986710 (-) | False | LOC113526375 |
| TU3260 | other | downstream | 2917520 | 4900886 ~ 4905207 (-) | True | G2709 |
| XR_004578678.1 | other | upstream | 85321 | 7908332 ~ 7921917 (-) | False | fxyd6l |
| TU5508 | other | upstream | 501571 | 8324582 ~ 8367964 (-) | True | G4658 |
| TU5903 | other | upstream | 1195396 | 9018407 ~ 9112988 (-) | True | G4948 |
| trnap-cgg | other | upstream | 1902239 | 9725250 ~ 9725321 (-) | True | trnap-cgg |
| TU6348 | other | upstream | 2042019 | 9865030 ~ 9866516 (-) | True | G5325 |
