Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU455252 |
| length | 210 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G384015 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 9197783 ~ 9197992 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU455248 | lncRNA | downstream | 5329 | 9192255 ~ 9192454 (-) | True | G384011 |
| TU455245 | lncRNA | downstream | 8259 | 9188985 ~ 9189524 (-) | True | G384008 |
| TU455244 | lncRNA | downstream | 10903 | 9186651 ~ 9186880 (-) | True | G384007 |
| TU455110 | lncRNA | downstream | 25665 | 9171838 ~ 9172118 (-) | True | G383893 |
| TU455050 | lncRNA | downstream | 100385 | 9095685 ~ 9097398 (-) | True | G383841 |
| TU455257 | lncRNA | upstream | 10640 | 9208632 ~ 9208835 (-) | True | G384020 |
| TU455264 | lncRNA | upstream | 19998 | 9217990 ~ 9218198 (-) | True | G384027 |
| TU455285 | lncRNA | upstream | 56209 | 9254201 ~ 9255436 (-) | False | LOC113531664 |
| XR_003403273.2 | lncRNA | upstream | 58503 | 9256495 ~ 9258816 (-) | True | LOC113531656 |
| XR_004577382.1 | lncRNA | upstream | 113781 | 9311773 ~ 9316605 (-) | False | LOC117596217 |
| XM_034300506.1 | mRNA | downstream | 74304 | 9113444 ~ 9123479 (-) | False | si:ch211-215c18.3 |
| XM_034300505.1 | mRNA | downstream | 74306 | 9113444 ~ 9123477 (-) | True | si:ch211-215c18.3 |
| XM_034300489.1 | mRNA | downstream | 89002 | 9105576 ~ 9108781 (-) | True | thy1 |
| XM_026922306.2 | mRNA | downstream | 96494 | 9089727 ~ 9101289 (-) | False | usf1l |
| XM_026922307.2 | mRNA | downstream | 96507 | 9089727 ~ 9101276 (-) | True | usf1l |
| XM_026922533.2 | mRNA | upstream | 42724 | 9240716 ~ 9255397 (-) | False | LOC113531664 |
| XM_026922289.2 | mRNA | upstream | 91019 | 9289011 ~ 9292581 (-) | True | timm22 |
| XM_026922513.2 | mRNA | upstream | 103182 | 9301174 ~ 9308503 (-) | True | ptges |
| XM_026922036.2 | mRNA | upstream | 122665 | 9320657 ~ 9346311 (-) | False | usp20 |
| XM_034300685.1 | mRNA | upstream | 122665 | 9320657 ~ 9346311 (-) | True | usp20 |
| TU455042 | other | downstream | 127533 | 9036866 ~ 9070250 (-) | False | ubash3ba |
| TU454979 | other | downstream | 189138 | 8919410 ~ 9008645 (-) | False | LOC113531288 |
| TU454858 | other | downstream | 358019 | 8837725 ~ 8839764 (-) | False | timm8b |
| TU454856 | other | downstream | 358049 | 8837679 ~ 8839734 (-) | False | timm8b |
| XR_004577369.1 | other | upstream | 42724 | 9240716 ~ 9255445 (-) | True | LOC113531664 |
| XR_004577368.1 | other | upstream | 42724 | 9240716 ~ 9255175 (-) | False | LOC113531664 |
| XR_003403282.1 | other | upstream | 484615 | 9682607 ~ 9682733 (-) | True | LOC113531680 |
| XR_003403284.2 | other | upstream | 484989 | 9682981 ~ 9683105 (-) | True | LOC113531682 |
| XR_003403281.1 | other | upstream | 486280 | 9684272 ~ 9684398 (-) | True | LOC113531679 |
