Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU215154 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G181779 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 15121455 ~ 15121666 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579123.1 | lncRNA | downstream | 57418 | 15060131 ~ 15064037 (-) | True | LOC117598447 |
| TU215082 | lncRNA | downstream | 138896 | 14977671 ~ 14982559 (-) | True | G181721 |
| TU215073 | lncRNA | downstream | 177239 | 14939037 ~ 14944216 (-) | True | G181713 |
| TU215063 | lncRNA | downstream | 214223 | 14904851 ~ 14907232 (-) | True | G181703 |
| TU214976 | lncRNA | downstream | 448726 | 14670909 ~ 14672729 (-) | True | G181638 |
| TU215156 | lncRNA | upstream | 4995 | 15126661 ~ 15127182 (-) | True | G181781 |
| TU215191 | lncRNA | upstream | 45492 | 15167158 ~ 15167671 (-) | True | G181810 |
| TU215665 | lncRNA | upstream | 566533 | 15688199 ~ 15688418 (-) | True | G182209 |
| TU215668 | lncRNA | upstream | 572303 | 15693969 ~ 15694702 (-) | True | G182212 |
| XR_003404752.2 | lncRNA | upstream | 708858 | 15830524 ~ 15833544 (-) | True | LOC113546824 |
| XM_026925943.2 | mRNA | downstream | 98807 | 14867923 ~ 15022648 (-) | True | nfia |
| XM_026910265.2 | mRNA | downstream | 282998 | 14711596 ~ 14838457 (-) | True | patj |
| XM_034309005.1 | mRNA | upstream | 5592 | 15127258 ~ 15132792 (-) | True | nphs2 |
| XM_026912928.2 | mRNA | upstream | 5592 | 15127258 ~ 15130925 (-) | False | nphs2 |
| XM_026928641.2 | mRNA | upstream | 166419 | 15288085 ~ 15298641 (-) | True | LOC113535381 |
| XM_026928627.2 | mRNA | upstream | 179382 | 15301048 ~ 15308956 (-) | False | hnrnpm |
| XM_026928626.2 | mRNA | upstream | 179382 | 15301048 ~ 15308955 (-) | False | hnrnpm |
| XR_004579061.1 | other | downstream | 541708 | 14553155 ~ 14579747 (-) | False | lama3 |
| XR_003402957.2 | other | downstream | 661118 | 14439854 ~ 14460337 (-) | False | zfr2 |
| XR_004579086.1 | other | downstream | 706386 | 14408726 ~ 14415069 (-) | False | rx1 |
| TU214564 | other | downstream | 759808 | 14360936 ~ 14361647 (-) | False | LOC113527598 |
| TU214009 | other | downstream | 1878293 | 13239749 ~ 13243162 (-) | False | rpp21 |
| TU215666 | other | upstream | 569108 | 15690774 ~ 15692350 (-) | True | G182210 |
| TU216001 | other | upstream | 1153216 | 16274882 ~ 16278809 (-) | True | micos13 |
| TU216002 | other | upstream | 1154002 | 16275668 ~ 16278809 (-) | False | micos13 |
| TU216000 | other | upstream | 1154200 | 16275866 ~ 16278809 (-) | False | micos13 |
| TU216003 | other | upstream | 1154200 | 16275866 ~ 16278857 (-) | False | micos13 |
