Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU216000 |
| length | 641 |
| RNA type | TUCP |
| GC content | 0.47 |
| exon number | 4 |
| gene id | micos13 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 16274882 ~ 16278857 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU215999 | lncRNA | downstream | 7436 | 16267386 ~ 16268430 (-) | True | G182494 |
| TU215998 | lncRNA | downstream | 15550 | 16260058 ~ 16260316 (-) | True | G182493 |
| TU215857 | lncRNA | downstream | 194563 | 16074631 ~ 16081303 (-) | False | G182372 |
| TU215858 | lncRNA | downstream | 194563 | 16074631 ~ 16081303 (-) | True | G182372 |
| TU215824 | lncRNA | downstream | 239444 | 16036209 ~ 16036422 (-) | True | G182341 |
| TU216023 | lncRNA | upstream | 43376 | 16322185 ~ 16323944 (-) | True | G182511 |
| TU216803 | lncRNA | upstream | 499208 | 16778017 ~ 16778955 (-) | True | G183145 |
| TU216838 | lncRNA | upstream | 567620 | 16846429 ~ 16849260 (-) | True | G183170 |
| TU216840 | lncRNA | upstream | 567620 | 16846429 ~ 16849260 (-) | False | G183170 |
| TU216841 | lncRNA | upstream | 567620 | 16846429 ~ 16849260 (-) | False | G183170 |
| XM_026924607.2 | mRNA | downstream | 103551 | 16123503 ~ 16172315 (-) | True | polrmt |
| XM_026929730.2 | mRNA | downstream | 265551 | 16002051 ~ 16010315 (-) | True | atp5f1d |
| XM_026919604.2 | mRNA | downstream | 285451 | 15971586 ~ 15990415 (-) | True | midn |
| XM_026916579.2 | mRNA | downstream | 389998 | 15880230 ~ 15885868 (-) | False | cirbpb |
| XM_034308831.1 | mRNA | upstream | 56144 | 16334953 ~ 16523168 (-) | False | celf5a |
| XM_034308830.1 | mRNA | upstream | 56144 | 16334953 ~ 16523168 (-) | False | celf5a |
| XM_026921572.2 | mRNA | upstream | 56144 | 16334953 ~ 16523168 (-) | False | celf5a |
| XM_026921564.2 | mRNA | upstream | 56144 | 16334953 ~ 16523168 (-) | True | celf5a |
| XM_026929893.2 | mRNA | upstream | 273488 | 16552297 ~ 16554351 (-) | True | rxfp3.2b |
| TU215666 | other | downstream | 583516 | 15690774 ~ 15692350 (-) | True | G182210 |
| XR_004579061.1 | other | downstream | 1696119 | 14553155 ~ 14579747 (-) | False | lama3 |
| XR_003402957.2 | other | downstream | 1815529 | 14439854 ~ 14460337 (-) | False | zfr2 |
| XR_004579086.1 | other | downstream | 1860797 | 14408726 ~ 14415069 (-) | False | rx1 |
| TU214564 | other | downstream | 1914219 | 14360936 ~ 14361647 (-) | False | LOC113527598 |
| TU216998 | other | upstream | 966963 | 17245772 ~ 17342243 (-) | False | zgc:172076 |
| trnav-uac_1 | other | upstream | 3031202 | 19310011 ~ 19310083 (-) | True | trnav-uac_1 |
| trnav-uac_2 | other | upstream | 3033002 | 19311811 ~ 19311883 (-) | True | trnav-uac_2 |
| trnai-uau_3 | other | upstream | 3033376 | 19312185 ~ 19312256 (-) | True | trnai-uau_3 |
| trnav-uac_3 | other | upstream | 3033563 | 19312372 ~ 19312444 (-) | True | trnav-uac_3 |
