Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnav-uac_1 |
| length | 73 |
| RNA type | tRNA |
| GC content | 0.45 |
| exon number | 1 |
| gene id | trnav-uac_1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 19310011 ~ 19310083 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU218279 | lncRNA | downstream | 38701 | 19220825 ~ 19271310 (-) | True | G184439 |
| XR_003402754.2 | lncRNA | downstream | 259534 | 19034294 ~ 19050477 (-) | True | LOC113526295 |
| TU218078 | lncRNA | downstream | 349157 | 18959249 ~ 18960854 (-) | True | G184255 |
| XR_003403144.2 | lncRNA | downstream | 361385 | 18940102 ~ 18948626 (-) | True | LOC113530379 |
| TU217596 | lncRNA | downstream | 1411658 | 17898146 ~ 17898353 (-) | True | G183826 |
| TU218309 | lncRNA | upstream | 6036 | 19316119 ~ 19316363 (-) | True | trnav-uac_6 |
| TU218427 | lncRNA | upstream | 89961 | 19400044 ~ 19403214 (-) | True | G184561 |
| TU218442 | lncRNA | upstream | 122640 | 19432723 ~ 19432927 (-) | True | G184576 |
| TU218443 | lncRNA | upstream | 123354 | 19433437 ~ 19437580 (-) | True | G184577 |
| TU218444 | lncRNA | upstream | 129625 | 19439708 ~ 19440069 (-) | True | G184578 |
| XM_034308665.1 | mRNA | downstream | 113665 | 19101740 ~ 19196346 (-) | False | adgrl2a |
| XM_034308670.1 | mRNA | downstream | 114424 | 19101740 ~ 19195587 (-) | False | adgrl2a |
| XM_034308669.1 | mRNA | downstream | 114424 | 19101740 ~ 19195587 (-) | False | adgrl2a |
| XM_034308668.1 | mRNA | downstream | 114424 | 19101740 ~ 19195587 (-) | False | adgrl2a |
| XM_034308667.1 | mRNA | downstream | 114424 | 19101740 ~ 19195587 (-) | False | adgrl2a |
| XM_026919367.2 | mRNA | upstream | 108601 | 19418684 ~ 19423950 (-) | True | lsm4 |
| XM_026919538.2 | mRNA | upstream | 113990 | 19424073 ~ 19429693 (-) | True | ddx49 |
| XM_026929313.1 | mRNA | upstream | 154558 | 19464641 ~ 19475095 (-) | True | comp |
| XM_026934149.2 | mRNA | upstream | 166737 | 19476820 ~ 19483819 (-) | True | tmem38a |
| XM_026922017.2 | mRNA | upstream | 350982 | 19661065 ~ 19664681 (-) | True | gamt |
| TU216998 | other | downstream | 1967768 | 17245772 ~ 17342243 (-) | False | zgc:172076 |
| TU216003 | other | downstream | 3031154 | 16275866 ~ 16278857 (-) | False | micos13 |
| TU216001 | other | downstream | 3031202 | 16274882 ~ 16278809 (-) | True | micos13 |
| TU216002 | other | downstream | 3031202 | 16275668 ~ 16278809 (-) | False | micos13 |
| TU216000 | other | downstream | 3031202 | 16275866 ~ 16278809 (-) | False | micos13 |
| trnav-uac_2 | other | upstream | 1728 | 19311811 ~ 19311883 (-) | True | trnav-uac_2 |
| trnai-uau_3 | other | upstream | 2102 | 19312185 ~ 19312256 (-) | True | trnai-uau_3 |
| trnav-uac_3 | other | upstream | 2289 | 19312372 ~ 19312444 (-) | True | trnav-uac_3 |
| trnav-uac_4 | other | upstream | 3413 | 19313496 ~ 19313568 (-) | True | trnav-uac_4 |
| trnav-uac_5 | other | upstream | 4930 | 19315013 ~ 19315085 (-) | True | trnav-uac_5 |
