RNA id: TCONS_00008088


Basic Information

Item Value
RNA id TCONS_00008088
length 115
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_004234
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 33966158 ~ 33966272 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCTTGCAGCTAGCTCTCTACAaatctcacatggtcgcccactgaagctaagcagagctgagccTGTTCAGAACCTGactgggagaccacatgggaaagctagattgctgccATAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000182688

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008832 lncRNA downstream 277209 33676834 ~ 33688949 (-) True XLOC_004229
TCONS_00008831 lncRNA downstream 280247 33676834 ~ 33685911 (-) False XLOC_004229
TCONS_00008481 lncRNA downstream 564682 33344982 ~ 33401476 (-) False XLOC_004227
TCONS_00008830 lncRNA downstream 564770 33305132 ~ 33401388 (-) False XLOC_004227
TCONS_00008829 lncRNA downstream 583325 33305132 ~ 33382833 (-) False XLOC_004227
TCONS_00008482 lncRNA upstream 25761 33992033 ~ 33993147 (-) True XLOC_004235
TCONS_00008099 lncRNA upstream 254078 34220350 ~ 34225557 (-) False XLOC_004242
TCONS_00008100 lncRNA upstream 256621 34222893 ~ 34225798 (-) True XLOC_004242
TCONS_00008101 lncRNA upstream 283184 34249456 ~ 34255220 (-) True XLOC_004243
TCONS_00008833 lncRNA upstream 349253 34315525 ~ 34358689 (-) True XLOC_004244
TCONS_00008087 mRNA downstream 5840 33921358 ~ 33960318 (-) True XLOC_004233
TCONS_00008085 mRNA downstream 46849 33870357 ~ 33919309 (-) False XLOC_004232
TCONS_00008086 mRNA downstream 47144 33873621 ~ 33919014 (-) True XLOC_004232
TCONS_00008084 mRNA downstream 97250 33864502 ~ 33868908 (-) True XLOC_004231
TCONS_00008082 mRNA downstream 97272 33861177 ~ 33868886 (-) False XLOC_004231
TCONS_00008089 mRNA upstream 30254 33996526 ~ 34065718 (-) True XLOC_004236
TCONS_00008090 mRNA upstream 118260 34084532 ~ 34097418 (-) False XLOC_004237
TCONS_00008091 mRNA upstream 125138 34091410 ~ 34097437 (-) True XLOC_004237
TCONS_00008092 mRNA upstream 150462 34116734 ~ 34147205 (-) False XLOC_004238
TCONS_00008093 mRNA upstream 152087 34118359 ~ 34124319 (-) True XLOC_004238
TCONS_00008078 other downstream 594791 33371251 ~ 33371367 (-) True XLOC_004227
TCONS_00008075 other downstream 1228565 32731165 ~ 32737593 (-) True XLOC_004221
TCONS_00008067 other downstream 2793904 31170349 ~ 31172254 (-) True XLOC_004210
TCONS_00008056 other downstream 3457367 30424226 ~ 30508791 (-) True XLOC_004205
TCONS_00008052 other downstream 3601334 30358109 ~ 30364824 (-) False XLOC_004204
TCONS_00008102 other upstream 389272 34355544 ~ 34355662 (-) True XLOC_004245
TCONS_00008105 other upstream 500123 34466395 ~ 34466513 (-) True XLOC_004247
TCONS_00008119 other upstream 1258750 35225022 ~ 35225139 (-) True XLOC_004254
TCONS_00008174 other upstream 3333099 37299371 ~ 37299485 (-) True XLOC_004279
TCONS_00008194 other upstream 4208799 38175071 ~ 38175150 (-) True XLOC_004294