RNA id: TCONS_00008105


Basic Information

Item Value
RNA id TCONS_00008105
length 119
RNA type rRNA
GC content 0.44
exon number 1
gene id XLOC_004247
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 34466395 ~ 34466513 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

taaaacgctcttttaaaactaaaacgcactagtgtaaacagggcctaagctAAGCAGGGCTTAGCCTGGTCACTACCTGAAtgcgagaccacatgggaaaaactaGGTTACTGTTGGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000172386

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008833 lncRNA downstream 107706 34315525 ~ 34358689 (-) True XLOC_004244
TCONS_00008101 lncRNA downstream 211175 34249456 ~ 34255220 (-) True XLOC_004243
TCONS_00008100 lncRNA downstream 240597 34222893 ~ 34225798 (-) True XLOC_004242
TCONS_00008099 lncRNA downstream 240838 34220350 ~ 34225557 (-) False XLOC_004242
TCONS_00008482 lncRNA downstream 473248 33992033 ~ 33993147 (-) True XLOC_004235
TCONS_00008834 lncRNA upstream 84334 34550847 ~ 34577001 (-) False XLOC_004249
TCONS_00008835 lncRNA upstream 971500 35438013 ~ 35441417 (-) True XLOC_004255
TCONS_00008836 lncRNA upstream 1112217 35578730 ~ 35741441 (-) False XLOC_004257
TCONS_00008483 lncRNA upstream 1113344 35579857 ~ 35585628 (-) False XLOC_004257
TCONS_00008484 lncRNA upstream 1198038 35664551 ~ 35741440 (-) False XLOC_004257
TCONS_00008098 mRNA downstream 233489 34219991 ~ 34232906 (-) False XLOC_004242
TCONS_00008097 mRNA downstream 247184 34201183 ~ 34219211 (-) True XLOC_004241
TCONS_00008095 mRNA downstream 278049 34154593 ~ 34188346 (-) False XLOC_004240
TCONS_00008096 mRNA downstream 299435 34158178 ~ 34166960 (-) True XLOC_004240
TCONS_00008094 mRNA downstream 314908 34151177 ~ 34151487 (-) True XLOC_004239
TCONS_00008106 mRNA upstream 22356 34488869 ~ 34522249 (-) False XLOC_004248
TCONS_00008107 mRNA upstream 22897 34489410 ~ 34518362 (-) False XLOC_004248
TCONS_00008108 mRNA upstream 22897 34489410 ~ 34521342 (-) True XLOC_004248
TCONS_00008109 mRNA upstream 88523 34555036 ~ 34577106 (-) False XLOC_004249
TCONS_00008110 mRNA upstream 90789 34557302 ~ 34572202 (-) False XLOC_004249
TCONS_00008102 other downstream 110733 34355544 ~ 34355662 (-) True XLOC_004245
TCONS_00008088 other downstream 500123 33966158 ~ 33966272 (-) True XLOC_004234
TCONS_00008078 other downstream 1095028 33371251 ~ 33371367 (-) True XLOC_004227
TCONS_00008075 other downstream 1728802 32731165 ~ 32737593 (-) True XLOC_004221
TCONS_00008067 other downstream 3294141 31170349 ~ 31172254 (-) True XLOC_004210
TCONS_00008119 other upstream 758509 35225022 ~ 35225139 (-) True XLOC_004254
TCONS_00008174 other upstream 2832858 37299371 ~ 37299485 (-) True XLOC_004279
TCONS_00008194 other upstream 3708558 38175071 ~ 38175150 (-) True XLOC_004294
TCONS_00008207 other upstream 4481474 38947987 ~ 38949751 (-) True XLOC_004305
TCONS_00008210 other upstream 4623362 39089875 ~ 39089991 (-) True XLOC_004308