| Item | Value |
|---|---|
| gene id | XLOC_004294 |
| gene name | NA |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 38149889 ~ 38198887 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048731 | system development | biological_process |
| GO:0050877 | nervous system process | biological_process |
| GO:0043010 | camera-type eye development | biological_process |
| GO:0048513 | animal organ development | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0050953 | sensory perception of light stimulus | biological_process |
| GO:0002088 | lens development in camera-type eye | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0048880 | sensory system development | biological_process |
| GO:0007626 | locomotory behavior | biological_process |
| GO:0003008 | system process | biological_process |
| GO:0032501 | multicellular organismal process | biological_process |
| GO:0032502 | developmental process | biological_process |
| GO:0001654 | eye development | biological_process |
| GO:0007423 | sensory organ development | biological_process |
| GO:0150063 | visual system development | biological_process |
| GO:0034706 | sodium channel complex | cellular_component |
| GO:0030424 | axon | cellular_component |
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| ensembl_id | ENSDARG00000080100 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00008855 | False | 14995 | lncRNA | 0.36 | 2 | 38149889 | 38180391 |
| TCONS_00008854 | False | 10371 | lncRNA | 0.37 | 3 | 38149889 | 38180391 |
| TCONS_00008856 | False | 16494 | lncRNA | 0.37 | 2 | 38149889 | 38190452 |
| TCONS_00008857 | False | 12447 | lncRNA | 0.38 | 3 | 38149889 | 38191029 |
| TCONS_00008858 | False | 41220 | lncRNA | 0.38 | 1 | 38149889 | 38191108 |
| TCONS_00008859 | False | 10358 | lncRNA | 0.37 | 3 | 38149889 | 38198887 |
| TCONS_00008194 | True | 80 | miRNA | 0.43 | 1 | 38175071 | 38175150 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_004293 | NA | coding | downstream | 62876 | 38084872 ~ 38087013 (-) |
| XLOC_004291 | klhdc8a | coding | downstream | 66416 | 38033115 ~ 38083473 (-) |
| XLOC_004292 | AL928854.1 | coding | downstream | 108467 | 38039964 ~ 38041422 (-) |
| XLOC_004289 | slc41a1 | coding | downstream | 152470 | 37948839 ~ 37997419 (-) |
| XLOC_004290 | NA | coding | downstream | 162331 | 37984951 ~ 37987558 (-) |
| XLOC_004295 | NA | coding | upstream | 140552 | 38339439 ~ 38425803 (-) |
| XLOC_004296 | elk4 | coding | upstream | 271658 | 38470545 ~ 38492564 (-) |
| XLOC_004297 | si:ch211-117k10.3 | coding | upstream | 306270 | 38505157 ~ 38513978 (-) |
| XLOC_004298 | slc45a3 | coding | upstream | 318368 | 38517255 ~ 38533505 (-) |
| XLOC_004299 | nucks1a | coding | upstream | 341251 | 38540138 ~ 38554394 (-) |
| XLOC_004063 | CR854846.1 | misc | downstream | 22022211 | 16127382 ~ 16127678 (-) |
| XLOC_004019 | CR450764.8 | misc | downstream | 25458198 | 12691395 ~ 12691691 (-) |
| XLOC_004015 | CR450764.4 | misc | downstream | 25528122 | 12621518 ~ 12621767 (-) |
| XLOC_004013 | CABZ01022569.1 | misc | downstream | 25558593 | 12590999 ~ 12591296 (-) |
| XLOC_004008 | BX000700.19 | misc | downstream | 25636627 | 12512966 ~ 12513262 (-) |
| XLOC_004287 | NA | non-coding | downstream | 322416 | 37780578 ~ 37827473 (-) |
| XLOC_004284 | NA | non-coding | downstream | 535351 | 37613547 ~ 37614538 (-) |
| XLOC_004305 | AL845324.2 | non-coding | upstream | 749100 | 38947987 ~ 38949751 (-) |
| XLOC_004308 | CU210919.2 | non-coding | upstream | 890988 | 39089875 ~ 39089991 (-) |
| XLOC_004311 | NA | non-coding | upstream | 1009297 | 39208184 ~ 39212765 (-) |
| XLOC_004312 | NA | non-coding | upstream | 1104710 | 39303597 ~ 39305163 (-) |