XLOC_004284


Basic Information

Item Value
gene id XLOC_004284
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 37613547 ~ 37614538 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008488
GCCTCCAGGATGATTTCTTCAACTTTGGGTTGGGAAAGTGAGGTTGAACCCAGTTTGTTGGCAGCAATGGTCGCCCAAGCAGGAATCTTCTTCTTTTTCACCTTCTTCCCTTTGTCATCACCTTCCTTGTCActTTTAGCTGCATCCTTTCCTCTTTTCTTCTTGCCCTTCCCTTGTTCAGCAGCTGCTTCGTCAGATTTCTCTCCCTCTCCGGCCTCTCCATCTTTGGCCTGCTCCTCTCCATCAGCAGTCGCCTCCTCTCCATCTCCTCCGGCTTTCTTGTCCTCCGTGTTTTCGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008488 True 298 lncRNA 0.51 2 37613547 37614538

Neighbor

gene id symbol gene type direction distance location
XLOC_004283 NA coding downstream 9566 37593008 ~ 37603981 (-)
XLOC_004281 bsnb coding downstream 24254 37431693 ~ 37589293 (-)
XLOC_004282 NA coding downstream 136579 37475513 ~ 37476968 (-)
XLOC_004280 erc2 coding downstream 188140 37310881 ~ 37425407 (-)
XLOC_004279 CR352285.2 coding downstream 314062 37299371 ~ 37299485 (-)
XLOC_004285 zgc:158258 coding upstream 68740 37683278 ~ 37693019 (-)
XLOC_004286 yod1 coding upstream 93846 37708384 ~ 37720266 (-)
XLOC_004287 NA coding upstream 166040 37780578 ~ 37827473 (-)
XLOC_004288 etnk2 coding upstream 234167 37848705 ~ 37880492 (-)
XLOC_004289 slc41a1 coding upstream 334301 37948839 ~ 37997419 (-)
XLOC_004063 CR854846.1 misc downstream 21485869 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 24921856 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 24991780 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 25022251 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 25100285 12512966 ~ 12513262 (-)
XLOC_004278 CR352285.1 non-coding downstream 315450 37297501 ~ 37298097 (-)
XLOC_004276 NA non-coding downstream 518013 37085620 ~ 37095534 (-)
XLOC_004290 NA non-coding upstream 370413 37984951 ~ 37987558 (-)
XLOC_004292 AL928854.1 non-coding upstream 425426 38039964 ~ 38041422 (-)
XLOC_004293 NA non-coding upstream 470334 38084872 ~ 38087013 (-)
XLOC_004294 NA non-coding upstream 535351 38149889 ~ 38198887 (-)

Expression


Co-expression Network