XLOC_004288 (etnk2)


Basic Information

Item Value
gene id XLOC_004288
gene name etnk2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 37848705 ~ 37880492 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008188
GAAACCAACGGTACCGGCATATGAGCCGCTCCTCTTTTTTTCTGCACATACTAAACCAGGCTGGACGTCCAGTGCATGTTCAAAACAAAACCTCCAGAACACAGAACGCTTAATATACACATCCAATACTTGAAGATTCAGAAAGTTTAATGTCGGGCATTAATAGGCAGATAAATCATATGATGGAGACGGAGATCCACGTGCCTGTAGGCTCACCGACGATAAGAAAATTTCAGATATTCGTTGACGAGCACAATGTGACGGAAGGGGCGATGAAGCTGATTAAAGAGCTCAGACCCGGCTGGGACCCGAACCTGATCCGCACTAAGCTTTTCACAGATGGCACCACTAACAAGCTGGTGGGCTGTTATGTGGAGGATTGCGTAGAGGACGTGGTTCTGGTCCGGGTGTACGGCAACAAGACAGAGCTGATCGTGGACCGGGACAATGAACTGAAGAGCTTTCAGGTTCTGCATGCCAACGGTTGTGCGCCCAGACTTTACTGCACCTTCCAGAATGGCATCTGCTACGAGTTCATGCAAGGACGCGCTCTGGATACCCAAGACGTCAGGGACCCCGTGCTGCTCAGACTGATCGCCCGTGAAATGGCTCGCATTCACGCCATCCACGCACACAACGGATGCATCCCCAAACCCAACCTGTGGATCAAAATGCGCAAGTACTTCTCACTAGTGGCCACAGAGTTCACAGAGCAAGCCTCCAACATCAGAATTCAGCAAGAAGTGCCCAGCCAGGAAGTGCTGGAGCAGGAAATGATGTGGATGAAGGAGCACCTGTCTCAGCTGGGCTCGCCTGTGGTGCTCTGTCACAATGACCTGCTCTGCAAGAACATCATTCACAATGCAAAAGAAGGTCATGTTCGATTTATCGACTATGAATACTCAAGTTACAATTACCAAGCATTTGACATTGGAAACCATTTCAATGAATTTGCAGGAATGAGTGAACCAGACTATAACCTTTACCCCAGTAGAGAGATGCAGCTGGACTGGTTGCAAACGTACCTGCAGGCCTACAAGCTCTTCACCAAGAAAGGTGAAGATGTGAGCGAGCGTGAACTGGAGACGCTCTACGTACAAGTCAACAAGTTTGCTCTGGCCTCTCATTTCTTCTGGGGTTTCTGGGCCCTGATCCAAGCCAAGTACTCAACCATCGAGTTTGACTTCCTCGGCTATGCAGTGCTACGATTCAATCAGTACTTCAAGACCAAACCTGCAGTAATGGCCCTGGAGATTCCCAAATGATTCTTCAAGACTGAGAGGACATCGCTGCTATCGGTTGGCCTCATCTTTGACCATTTGACCACTGATTCAGAGGCCTTTCCGGTCAGGGGAGGGAATAGGGTACTGCAGGGGGGAGCACTAGCACCTCTTTTAATTGGTTGGCAAATTGTCTACCAAATCATAGCTCCACAAATTCTTTATTCCTTCTCATTTCTCTTTGGGATTTCACTCCTAGTTGATCAAAATTCCCAAGAAGTGAgtgcatttttatgttttaaatacactttatttattaactgttatgGGGCA

Function

symbol description
etnk2 Predicted to enable kinase activity. Predicted to act upstream of or within phosphorylation. Orthologous to human ETNK2 (ethanolamine kinase 2).

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0005575 cellular_component cellular_component
GO:0016740 transferase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050913-135 Predicted to enable kinase activity. Predicted to act upstream of or within phosphorylation. Orthologous to human ETNK2 (ethanolamine kinase 2).

Ensembl:

ensembl_id ENSDARG00000070213

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008188 True 1553 mRNA 0.48 8 37848705 37880492

Neighbor

gene id symbol gene type direction distance location
XLOC_004287 NA coding downstream 21232 37780578 ~ 37827473 (-)
XLOC_004286 yod1 coding downstream 128439 37708384 ~ 37720266 (-)
XLOC_004285 zgc:158258 coding downstream 155686 37683278 ~ 37693019 (-)
XLOC_004284 NA coding downstream 234167 37613547 ~ 37614538 (-)
XLOC_004283 NA coding downstream 244724 37593008 ~ 37603981 (-)
XLOC_004289 slc41a1 coding upstream 68347 37948839 ~ 37997419 (-)
XLOC_004290 NA coding upstream 104459 37984951 ~ 37987558 (-)
XLOC_004291 klhdc8a coding upstream 152623 38033115 ~ 38083473 (-)
XLOC_004292 AL928854.1 coding upstream 159472 38039964 ~ 38041422 (-)
XLOC_004293 NA coding upstream 204380 38084872 ~ 38087013 (-)
XLOC_004063 CR854846.1 misc downstream 21721027 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 25157014 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 25226938 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 25257409 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 25335443 12512966 ~ 12513262 (-)
XLOC_004282 NA non-coding downstream 371737 37475513 ~ 37476968 (-)
XLOC_004279 CR352285.2 non-coding downstream 549220 37299371 ~ 37299485 (-)
XLOC_004294 NA non-coding upstream 269397 38149889 ~ 38198887 (-)
XLOC_004295 NA non-coding upstream 458947 38339439 ~ 38425803 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000306_09944940_09958459 ETNK2 coding CI01000306 null 9944631 ~ 9959168 (-)
bowfin (Amia calva) AMCG00013924 etnk2,LOC106565623,LOC107694884 coding CM030125.1 CM030125.1 47123708 ~ 47132176 (+)