XLOC_004291 (klhdc8a)


Basic Information

Item Value
gene id XLOC_004291
gene name klhdc8a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 38033115 ~ 38083473 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008191
GCCAATTATTCACTCCAAACTCGCACTTTTGAAAAGCACCCAGCGCTTAAATTGTGAATTTTCCTCAACTTTTTTTCTAGGTTAATAAACATCAACATGAACCCCGAGAGAAAAGACTCCTGCAACTTTTAATTCCAGCACAGGAAGCGTCGTTTGCTTAGACGCTACAATGAGATGGTCTGAATGTAggttatcatcatcatcagacgCACTGGAGCCCCCTCGAGCGCTCCCGAAATTAATGTCAGAATGACGAATATGATGAAGGGCTGCGCTGAATATTTCATGTATGACCCATATGAGGGGAAGGAGAGAGAGGTAGAGATGCTGGAGACCGAGCTGTGCTGATGCTGCCGACAGACTCACTGAGGAAGGGTCTTTTTTTTCCTTCCACGCGCGGATTATTACTGCTCTGCACCGCTTGAAGATCCAGGGAAGCACCCGAGGAGAATCGGAAGAAACCGAAGCCCAGACCCCGAAAAGTGCTGATTCCGAAACACCACCCAATCGGTCAGGGCGATGATGGTGCCCTCGGCCCATGAGTTTCATTGGCAGAGCCTGGCGAGTCTTTCCAGTGCACGCGTCTATCACTCGTTGGCTGATGTGGGTGGGCAGCTGTATTTGGTTGGTGGTTGCGATGCTTCGGGGCAGCCCACCAGCGCTCTGGAGCTGTACTCGCCCGAGGTGGACCGCTGGCTCAGTCTTCCTCCAATGCCCACGCCGAGAGCCGGGGCTGCGGTGGCAGTTTTGGGGAAGCAGCTGCTGGTGGTCGGTGGGATGGGGAAGGAACAGCGCCCTCTGAAGGCCGTGGAGGTTTACAACACAGATGAAGGGAAATGGAGGAAGAGGTGCTCGCTCAGAGAGGCGTCTATGGGGGTTTCTGTCACCGTTAAAGACGGCAGAGCTCTGGCTGTTGGGGGAATGGGACCAGACCTCCTGCCCAGGAGTGTGCTTCAGCAGTACGACCTTCGCAAGGACGTCTGGGCGCTCCTTCCAGCAATGCCCACCCCGCGCTACGATACCAGCATCTGCCTACTGGGCTCCAAGATCTACGTGGCAGGTGGACGTCAGTGTAAGCGTTTAGTCAAGGCGTTTGAAGTCTTCGACATGGAAAACCGCACCTGGTCCTCTTTACCCAGCCTGCCTTGCAAAAGATCTTATTCTGGGGTCTTATGGGACAGCGCTGGGTGTCTCTGCTGGTTAGGAGGACTCAGACAAGGAGGAATACACCAAAGCTCAAAGTTTACAAAGAATGTTAACATCTTCGACACCAACAAAGGAGTTTGGCTGAAATCAGAGGACACCGTACCCTTGAAGACAAAGCGGGCAGACTTTGCTGCAGCCATAGTGCGAGGCAGAATGATCGTGGCGGGAGGTCTAGGCCATCAGCCATCAGTGCTGGACACTGTTGAAGCTTTTCATCCCGAAAAAAGGAAATGGGAAAGGCTGTCGCCCATGGCCACGCCGCGCTGCTCTGCCTCCAGCATCGTGATCCGGGATCGCCTGTTGGTAGTGGGAGGTGTCAATCAAGTCCCAAGCTCCGCCCATGAGATTCTATATGTTAAAGAGGAAGAGATTCTTTAACCACTGAACTACTTTAGGTTTACGCTGGGAGAAAAAAAAGGTGGCCTTCAATGATCTAGTAAAACAAATGTTTATACTAAAGGTGCGGTTACAAGTAACATTGCTCAGATAAATTCATCGATTCCAGTATGATTCTACACAGGACAAAAATGAATTTAGAccctgtccacacaaacacgggtatttaacccttgtgtaatGTTCAAATTAGGTAAAGTAAGACACTAAAGGTTTATATTTATTCCACCTTTCCTAGACAtgagtcacaaagtgctttacaattaAAGAAAACCAGAAAAAGTACACATATAAATTAAAGAAaacataa
>TCONS_00008193
AACGCATTTGTTGAATTTGACGCTAATTATTAAGTGCCTCTTCCTGTCATTCCATCTCAGCTTCCTGTGGGGCGTGGCCAATTATTCACTCCAAACTCGCACTTTTGAAAAGCACCCAGCGCTTAAATTGTGAATTTTCCTCAACTTTTTTTCTAGGTTAATAAACATCAACATGAACCCCGAGAGAAAAGACTCCTGCAACTTTTAATTCCAGCACAGGAAGCGTCGTTTGCTTAGACGCTACAATGAGATGGTCTGAATGTAggttatcatcatcatcagacgCACTGGAGCCCCCTCGAGCGCTCCCGAAATTAATGTCAGAATGACGAATATGATGAAGGGCTGCGCTGAATATTTCATGTATGACCCATATGAGGGGAAGGAGAGAGAGGTAGAGATGCTGGAGACCGAGCTGTGCTGATGCTGCCGACAGACTCACTGAGGAAGGGTCTTTTTTTTCCTTCCACGCGCGGATTATTACTGCTCTGCACCGCTTGAAGATCCAGGGAAGCACCCGAGGAGAATCGGAAGAAACCGAAGCCCAGACCCCGAAAAGTGCTGATTCCGAAACACCACCCAATCGGTCAGGGCGATGATGGTGCCCTCGGCCCATGAGTTTCATTGGCAGAGCCTGGCGAGTCTTTCCAGTGCACGCGTCTATCACTCGTTGGCTGATGTGGGTGGGCAGCTGTATTTGGTTGGTGGTTGCGATGCTTCGGGGCAGCCCACCAGCGCTCTGGAGCTGTACTCGCCCGAGGTGGACCGCTGGCTCAGTCTTCCTCCAATGCCCACGCCGAGAGCCGGGGCTGCGGTGGCAGTTTTGGGGAAGCAGCTGCTGGTGGTCGGTGGGATGGGGAAGGAACAGCGCCCTCTGAAGGCCGTGGAGGTTTACAACACAGATGAAGGGAAATGGAGGAAGAGGTGCTCGCTCAGAGAGGCGTCTATGGGGGTTTCTGTCACCGTTAAAGACGGCAGAGCTCTGGCTGTTGGGGGAATGGGACCAGACCTCCTGCCCAGGAGTGTGCTTCAGCAGTACGACCTTCGCAAGGACGTCTGGGCGCTCCTTCCAGCAATGCCCACCCCGCGCTACGATACCAGCATCTGCCTACTGGGCTCCAAGATCTACGTGGCAGGTTTGCGATCACCACTTAAATTCCATCTCAAATCTTAATTGAATAATATGTGGACTTACAGGTGTTTAAGACCTCACTGTAGATTTAGGAATCACCCTCCTACCTATAgaactgcatgatattggaaaaaaaattacattgtgatattttgttttttaacagttATTCAACAATATTGCTATATGAATATGTACATATTATATCAATATCGTTATATATTCAACAATATTCTTATATGAATATGTACATATTATATCAATATCGTTATATATTCAAC

Function

symbol description
klhdc8a Orthologous to human KLHDC8A (kelch domain containing 8A).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-120810-3 Orthologous to human KLHDC8A (kelch domain containing 8A).

Ensembl:

ensembl_id ENSDARG00000061000

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008191 False 1912 mRNA 0.50 6 38033115 38083397
TCONS_00008193 True 1413 mRNA 0.48 3 38050621 38083473

Neighbor

gene id symbol gene type direction distance location
XLOC_004289 slc41a1 coding downstream 35696 37948839 ~ 37997419 (-)
XLOC_004290 NA coding downstream 45557 37984951 ~ 37987558 (-)
XLOC_004288 etnk2 coding downstream 152623 37848705 ~ 37880492 (-)
XLOC_004287 NA coding downstream 205642 37780578 ~ 37827473 (-)
XLOC_004286 yod1 coding downstream 312849 37708384 ~ 37720266 (-)
XLOC_004293 NA coding upstream 1399 38084872 ~ 38087013 (-)
XLOC_004294 NA coding upstream 66416 38149889 ~ 38198887 (-)
XLOC_004295 NA coding upstream 255966 38339439 ~ 38425803 (-)
XLOC_004296 elk4 coding upstream 387072 38470545 ~ 38492564 (-)
XLOC_004297 si:ch211-117k10.3 coding upstream 421684 38505157 ~ 38513978 (-)
XLOC_004063 CR854846.1 misc downstream 21905437 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 25341424 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 25411348 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 25441819 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 25519853 12512966 ~ 12513262 (-)
XLOC_004284 NA non-coding downstream 418577 37613547 ~ 37614538 (-)
XLOC_004283 NA non-coding downstream 429134 37593008 ~ 37603981 (-)
XLOC_004282 NA non-coding downstream 556147 37475513 ~ 37476968 (-)
XLOC_004305 AL845324.2 non-coding upstream 864514 38947987 ~ 38949751 (-)
XLOC_004308 CU210919.2 non-coding upstream 1006402 39089875 ~ 39089991 (-)

Expression


Co-expression Network