Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU483751 |
| length | 735 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 8 |
| gene id | LOC117596542 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047624.1 |
| NCBI id | CM018570.1 |
| chromosome length | 11744058 |
| location | 3869287 ~ 3934235 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU483758 | lncRNA | upstream | 17864 | 3843685 ~ 3851423 (+) | False | LOC113528760 |
| TU483705 | lncRNA | upstream | 125621 | 3743413 ~ 3743666 (+) | True | G407506 |
| TU483698 | lncRNA | upstream | 144027 | 3722887 ~ 3725260 (+) | True | G407499 |
| TU483673 | lncRNA | upstream | 203886 | 3662036 ~ 3665401 (+) | False | cdk19 |
| TU483672 | lncRNA | upstream | 207534 | 3661283 ~ 3661753 (+) | False | cdk19 |
| TU484298 | lncRNA | downstream | 366902 | 4252893 ~ 4253907 (+) | True | G407959 |
| TU484314 | lncRNA | downstream | 397881 | 4283872 ~ 4285837 (+) | True | G407971 |
| TU484301 | lncRNA | downstream | 406321 | 4292312 ~ 4293015 (+) | True | G407962 |
| TU484433 | lncRNA | downstream | 520366 | 4406357 ~ 4406609 (+) | True | G408057 |
| XR_004577601.1 | lncRNA | downstream | 780695 | 4666686 ~ 4668701 (+) | True | LOC117596517 |
| XM_034301886.1 | mRNA | upstream | 5807 | 3811890 ~ 3863480 (+) | True | LOC113528760 |
| XM_034302161.1 | mRNA | upstream | 149992 | 3672852 ~ 3719295 (+) | True | tab2 |
| XM_034302159.1 | mRNA | upstream | 149992 | 3672852 ~ 3719295 (+) | False | tab2 |
| XM_034302160.1 | mRNA | upstream | 149992 | 3672852 ~ 3719295 (+) | False | tab2 |
| XM_034302162.1 | mRNA | upstream | 149992 | 3691856 ~ 3719295 (+) | False | tab2 |
| XM_034302095.1 | mRNA | downstream | 48423 | 3934414 ~ 3940175 (+) | False | LOC117596606 |
| XM_034302097.1 | mRNA | downstream | 48426 | 3934417 ~ 3940171 (+) | False | LOC117596606 |
| XM_034302096.1 | mRNA | downstream | 48705 | 3934696 ~ 3940174 (+) | True | LOC117596606 |
| XM_026918398.2 | mRNA | downstream | 120752 | 4006743 ~ 4164910 (+) | True | LOC113529295 |
| XM_034302192.1 | mRNA | downstream | 120752 | 4006743 ~ 4164910 (+) | False | LOC113529295 |
| XR_004577674.1 | other | upstream | 119040 | 3672852 ~ 3750247 (+) | False | tab2 |
| XR_004577675.1 | other | upstream | 119040 | 3672852 ~ 3750247 (+) | False | tab2 |
| XR_004577676.1 | other | upstream | 119096 | 3672852 ~ 3750191 (+) | False | tab2 |
| XR_004577677.1 | other | upstream | 119096 | 3672852 ~ 3750191 (+) | False | tab2 |
| TU483674 | other | upstream | 160918 | 3672926 ~ 3708369 (+) | False | tab2 |
| XR_004577669.1 | other | downstream | 769973 | 4655964 ~ 4659695 (+) | True | LOC113529331 |
| XR_003403042.2 | other | downstream | 769973 | 4655964 ~ 4659695 (+) | False | LOC113529331 |
| TU485026 | other | downstream | 1847804 | 5733795 ~ 5736261 (+) | False | lyrm2 |
| trnag-gcc_30 | other | downstream | 1856801 | 5742792 ~ 5742862 (+) | True | trnag-gcc_30 |
| XR_004577658.1 | other | downstream | 2386041 | 6272032 ~ 6276665 (+) | True | LOC117596600 |
