Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000139 |
| length | 1176 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 9 |
| gene id | AMCG00000139 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 5207350 ~ 5237287 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K00913 | ITPK1; inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU186651 | lncRNA | upstream | 46155 | 5088439 ~ 5161195 (+) | False | AMCG00000136 |
| TU186654 | lncRNA | upstream | 47817 | 5132609 ~ 5159533 (+) | False | AMCG00000136 |
| TU186462 | lncRNA | upstream | 624799 | 4582311 ~ 4582551 (+) | True | G148200 |
| TU186374 | lncRNA | upstream | 1014317 | 4116753 ~ 4193033 (+) | False | AMCG00000113 |
| TU186722 | lncRNA | downstream | 75591 | 5312878 ~ 5314953 (+) | False | AMCG00000145 |
| TU186736 | lncRNA | downstream | 102459 | 5339746 ~ 5340548 (+) | False | AMCG00000146 |
| TU186749 | lncRNA | downstream | 116664 | 5353951 ~ 5354185 (+) | True | G148396 |
| TU186759 | lncRNA | downstream | 145281 | 5382568 ~ 5388814 (+) | True | G148402 |
| TU186817 | lncRNA | downstream | 303392 | 5540679 ~ 5544478 (+) | True | G148452 |
| AMCG00000137 | mRNA | upstream | 35924 | 5170061 ~ 5171426 (+) | True | AMCG00000137 |
| AMCG00000136 | mRNA | upstream | 49886 | 5140428 ~ 5157464 (+) | True | AMCG00000136 |
| AMCG00000135 | mRNA | upstream | 85120 | 5117082 ~ 5122230 (+) | True | AMCG00000135 |
| AMCG00000159 | mRNA | upstream | 121403 | 4940648 ~ 5085947 (+) | True | AMCG00000159 |
| AMCG00000133 | mRNA | upstream | 273154 | 4931735 ~ 4934196 (+) | True | AMCG00000133 |
| AMCG00000145 | mRNA | downstream | 69903 | 5307190 ~ 5312961 (+) | True | AMCG00000145 |
| AMCG00000148 | mRNA | downstream | 83058 | 5320345 ~ 5329033 (+) | True | AMCG00000148 |
| AMCG00000146 | mRNA | downstream | 97226 | 5334513 ~ 5340550 (+) | True | AMCG00000146 |
| AMCG00000152 | mRNA | downstream | 103615 | 5340902 ~ 5373337 (+) | True | AMCG00000152 |
| AMCG00000147 | mRNA | downstream | 138328 | 5375615 ~ 5380159 (+) | True | AMCG00000147 |
| TU186262 | other | upstream | 1446726 | 3760179 ~ 3760624 (+) | True | G148040 |
| TU186257 | other | upstream | 1483034 | 3720985 ~ 3724316 (+) | True | AMCG00000093 |
| TU186234 | other | upstream | 1511548 | 3693109 ~ 3695802 (+) | False | AMCG00000094 |
| TU185878 | other | upstream | 2803378 | 2403730 ~ 2403972 (+) | True | G147726 |
| TU185496 | other | upstream | 4090400 | 1063085 ~ 1116950 (+) | True | G147416 |
| TU186772 | other | downstream | 197871 | 5435158 ~ 5435762 (+) | False | AMCG00000142 |
| TU186901 | other | downstream | 643736 | 5881023 ~ 5888027 (+) | True | AMCG00000166 |
| TU187068 | other | downstream | 1234144 | 6471431 ~ 6474232 (+) | True | AMCG00000201 |
| TU187079 | other | downstream | 1279220 | 6516507 ~ 6520822 (+) | False | AMCG00000198 |
| TU187266 | other | downstream | 2053379 | 7290666 ~ 7296664 (+) | False | AMCG00000216 |
