Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00010730 |
| length | 1021 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 4 |
| gene id | XLOC_004593 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 15111405 ~ 15115431 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0022613 | ribonucleoprotein complex biogenesis | biological_process |
| GO:0042254 | ribosome biogenesis | biological_process |
| GO:0042273 | ribosomal large subunit biogenesis | biological_process |
| GO:0005634 | nucleus | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00010727 | lncRNA | upstream | 297484 | 14815600 ~ 14815945 (+) | True | XLOC_004590 |
| TCONS_00010899 | lncRNA | upstream | 368727 | 14741152 ~ 14744702 (+) | False | XLOC_004589 |
| TCONS_00010725 | lncRNA | upstream | 368755 | 14742229 ~ 14744674 (+) | False | XLOC_004589 |
| TCONS_00010726 | lncRNA | upstream | 368755 | 14742710 ~ 14744674 (+) | True | XLOC_004589 |
| TCONS_00010898 | lncRNA | upstream | 982971 | 14087415 ~ 14130458 (+) | False | XLOC_004585 |
| TCONS_00009124 | lncRNA | downstream | 33309 | 15148740 ~ 15178482 (+) | False | XLOC_004594 |
| TCONS_00010731 | lncRNA | downstream | 788693 | 15904124 ~ 15925797 (+) | True | XLOC_004602 |
| TCONS_00010901 | lncRNA | downstream | 832605 | 15948036 ~ 15948551 (+) | True | XLOC_004603 |
| TCONS_00010902 | lncRNA | downstream | 1101217 | 16216648 ~ 16229550 (+) | False | XLOC_004606 |
| TCONS_00010903 | lncRNA | downstream | 1101653 | 16217084 ~ 16229550 (+) | False | XLOC_004606 |
| TCONS_00009122 | mRNA | upstream | 31062 | 15078124 ~ 15082367 (+) | True | XLOC_004592 |
| TCONS_00009121 | mRNA | upstream | 102433 | 15008582 ~ 15010996 (+) | True | XLOC_004591 |
| TCONS_00009120 | mRNA | upstream | 102650 | 15002757 ~ 15010779 (+) | False | XLOC_004591 |
| TCONS_00009119 | mRNA | upstream | 410000 | 14676349 ~ 14703429 (+) | True | XLOC_004588 |
| TCONS_00009118 | mRNA | upstream | 410003 | 14556092 ~ 14703426 (+) | False | XLOC_004588 |
| TCONS_00009123 | mRNA | downstream | 33187 | 15148618 ~ 15196223 (+) | False | XLOC_004594 |
| TCONS_00009125 | mRNA | downstream | 50305 | 15165736 ~ 15195868 (+) | True | XLOC_004594 |
| TCONS_00009126 | mRNA | downstream | 157873 | 15273304 ~ 15311845 (+) | False | XLOC_004595 |
| TCONS_00009127 | mRNA | downstream | 175369 | 15290800 ~ 15311999 (+) | True | XLOC_004595 |
| TCONS_00009128 | mRNA | downstream | 248032 | 15363463 ~ 15461462 (+) | True | XLOC_004596 |
| TCONS_00009115 | other | upstream | 1009623 | 14102104 ~ 14103806 (+) | True | XLOC_004585 |
| TCONS_00009106 | other | upstream | 1455285 | 13658022 ~ 13658144 (+) | True | XLOC_004581 |
| TCONS_00009101 | other | upstream | 1656073 | 13457237 ~ 13457356 (+) | True | XLOC_004579 |
| TCONS_00009094 | other | upstream | 1820662 | 13283774 ~ 13292767 (+) | True | XLOC_004575 |
| TCONS_00009079 | other | upstream | 2499978 | 12613335 ~ 12613451 (+) | True | XLOC_004569 |
| TCONS_00009129 | other | downstream | 266263 | 15381694 ~ 15381814 (+) | True | XLOC_004597 |
| TCONS_00009153 | other | downstream | 1845262 | 16960693 ~ 16960781 (+) | True | XLOC_004618 |
| TCONS_00009163 | other | downstream | 2230119 | 17345550 ~ 17345667 (+) | True | XLOC_004624 |
| TCONS_00009172 | other | downstream | 2612111 | 17727542 ~ 17727651 (+) | True | XLOC_004630 |
| TCONS_00009175 | other | downstream | 2812440 | 17927871 ~ 17941043 (+) | False | XLOC_004633 |
