Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00001618 |
| length | 1170 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 11 |
| gene id | AMCG00001618 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030143.1 |
| NCBI id | CM030143.1 |
| chromosome length | 20516281 |
| location | 9218629 ~ 9229998 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0032259 | methylation | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0008168 | methyltransferase activity | molecular_function |
| id | description |
|---|---|
| K18162 | NDUFAF5; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU200303 | lncRNA | upstream | 4282 | 9210120 ~ 9214347 (+) | True | G159101 |
| TU200229 | lncRNA | upstream | 440884 | 8776937 ~ 8777745 (+) | True | G159041 |
| TU200005 | lncRNA | upstream | 913789 | 8302550 ~ 8304840 (+) | True | G158857 |
| TU199985 | lncRNA | upstream | 961440 | 8165773 ~ 8257189 (+) | True | G158837 |
| TU199968 | lncRNA | upstream | 1116214 | 8101451 ~ 8102415 (+) | True | G158823 |
| TU200359 | lncRNA | downstream | 86113 | 9316111 ~ 9369910 (+) | True | G159142 |
| TU200389 | lncRNA | downstream | 632962 | 9862960 ~ 9863228 (+) | True | G159170 |
| TU200388 | lncRNA | downstream | 639170 | 9869168 ~ 9869603 (+) | True | G159169 |
| TU200427 | lncRNA | downstream | 839932 | 10069930 ~ 10070334 (+) | True | G159204 |
| TU200444 | lncRNA | downstream | 927736 | 10157734 ~ 10159818 (+) | False | AMCG00001630 |
| AMCG00001616 | mRNA | upstream | 63613 | 9150017 ~ 9155016 (+) | True | AMCG00001616 |
| AMCG00001617 | mRNA | upstream | 83266 | 9093769 ~ 9135363 (+) | True | AMCG00001617 |
| AMCG00001613 | mRNA | upstream | 189835 | 9017866 ~ 9028794 (+) | True | AMCG00001613 |
| AMCG00001614 | mRNA | upstream | 251891 | 8947413 ~ 8966738 (+) | True | AMCG00001614 |
| AMCG00001610 | mRNA | upstream | 403312 | 8805321 ~ 8815317 (+) | True | AMCG00001610 |
| AMCG00001626 | mRNA | downstream | 6413 | 9236411 ~ 9247003 (+) | True | AMCG00001626 |
| AMCG00001634 | mRNA | downstream | 737417 | 9967415 ~ 9970362 (+) | True | AMCG00001634 |
| AMCG00001635 | mRNA | downstream | 741355 | 9971353 ~ 9972980 (+) | True | AMCG00001635 |
| AMCG00001633 | mRNA | downstream | 784225 | 10014223 ~ 10050694 (+) | True | AMCG00001633 |
| AMCG00001631 | mRNA | downstream | 865362 | 10095360 ~ 10097803 (+) | True | AMCG00001631 |
| TU199983 | other | upstream | 1056814 | 8159146 ~ 8161815 (+) | True | G158836 |
| TU199853 | other | upstream | 1285074 | 7933156 ~ 7933555 (+) | True | G158725 |
| TU199783 | other | upstream | 1471649 | 7746681 ~ 7746980 (+) | True | G158676 |
| TU199779 | other | upstream | 1480739 | 7736515 ~ 7737890 (+) | True | G158672 |
| TU199732 | other | upstream | 1538846 | 7671314 ~ 7679783 (+) | False | AMCG00001550 |
| TU200393 | other | downstream | 683310 | 9913308 ~ 9914664 (+) | True | G159174 |
| TU201065 | other | downstream | 3099990 | 12329988 ~ 12331448 (+) | True | AMCG00001691 |
| TU201467 | other | downstream | 5039617 | 14269615 ~ 14270190 (+) | True | G160026 |
| TU201667 | other | downstream | 6101622 | 15331620 ~ 15334567 (+) | False | AMCG00001760 |
| TU201717 | other | downstream | 6202339 | 15432337 ~ 15439031 (+) | True | AMCG00001762 |
