RNA id: TU156701


Basic Information

Item Value
RNA id TU156701
length 232
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G125022
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 25456656 ~ 25456887 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGTTAGCATGAGTATGGTAATGCTGAGCTATAAATTCTAAGTCATTAATACCCCACTGCCTTCAGCAGAGATTGACCCAGTTTTCACCACCTGCTCTTAACACCAGAGGGGAAAGCAGGCTATTGGTGTTCGAATCATCATCATGTGAAAGATAACGGTTACTCCAATCTGCATGGAGCATTTCTACAGTTAAAAGCCTGTTTAATGTCCAGGGTGAGATCATTGTTGACCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU156696 lncRNA upstream 72344 25374942 ~ 25384312 (+) False AMCG00002661
TU156697 lncRNA upstream 72344 25374942 ~ 25384312 (+) False AMCG00002661
TU156686 lncRNA upstream 127795 25328180 ~ 25328861 (+) True G125011
TU156679 lncRNA upstream 153501 25299701 ~ 25303155 (+) True G125005
TU156671 lncRNA upstream 317384 25138980 ~ 25139272 (+) True G124999
TU156818 lncRNA downstream 397271 25854158 ~ 25862306 (+) True G125109
TU156955 lncRNA downstream 905325 26362212 ~ 26367539 (+) False G125219
TU156957 lncRNA downstream 905325 26362212 ~ 26366432 (+) False G125219
TU156958 lncRNA downstream 915692 26372579 ~ 26376125 (+) True G125220
TU157042 lncRNA downstream 1197098 26653985 ~ 26655168 (+) True G125288
AMCG00002663 mRNA upstream 882 25447921 ~ 25455774 (+) True AMCG00002663
AMCG00002662 mRNA upstream 22788 25413831 ~ 25433868 (+) True AMCG00002662
AMCG00002661 mRNA upstream 72453 25378941 ~ 25384203 (+) True AMCG00002661
AMCG00002658 mRNA upstream 158488 25279992 ~ 25298168 (+) True AMCG00002658
AMCG00002659 mRNA upstream 322392 25129616 ~ 25134264 (+) True AMCG00002659
AMCG00002664 mRNA downstream 2914 25459801 ~ 25506282 (+) True AMCG00002664
AMCG00002667 mRNA downstream 100096 25556983 ~ 25573560 (+) True AMCG00002667
AMCG00002668 mRNA downstream 152807 25609694 ~ 25618765 (+) True AMCG00002668
AMCG00002669 mRNA downstream 165438 25622325 ~ 25645029 (+) True AMCG00002669
AMCG00002677 mRNA downstream 569658 26026545 ~ 26030667 (+) True AMCG00002677
TU156498 other upstream 1034043 24422252 ~ 24422613 (+) True G124863
TU156391 other upstream 1775271 23677935 ~ 23681385 (+) True G124769
TU156281 other upstream 2166121 23152648 ~ 23290535 (+) True G124689
TU156269 other upstream 2276613 23068124 ~ 23180043 (+) True AMCG00002623
TU155679 other upstream 5180401 20274089 ~ 20276255 (+) True AMCG00002573
TU156924 other downstream 818704 26275591 ~ 26278973 (+) False AMCG00002684
TU156956 other downstream 905325 26362212 ~ 26369525 (+) True G125219

Expression Profile