Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003516 |
| length | 279 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 2 |
| gene id | AMCG00003516 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 7045216 ~ 7047403 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005783 | endoplasmic reticulum | cellular_component |
| GO:0031090 | organelle membrane | cellular_component |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | molecular_function |
| GO:0004497 | monooxygenase activity | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1177 | lncRNA | upstream | 1058822 | 5986038 ~ 5986394 (+) | True | G990 |
| TU1170 | lncRNA | upstream | 1089396 | 5955604 ~ 5955820 (+) | True | G983 |
| TU1140 | lncRNA | upstream | 1215471 | 5829459 ~ 5829745 (+) | True | G960 |
| TU1088 | lncRNA | upstream | 1486701 | 5557607 ~ 5558515 (+) | True | G908 |
| TU1087 | lncRNA | upstream | 1488910 | 5550745 ~ 5556306 (+) | True | G907 |
| TU1358 | lncRNA | downstream | 26001 | 7073404 ~ 7073609 (+) | True | G1146 |
| TU1403 | lncRNA | downstream | 317541 | 7364944 ~ 7365477 (+) | True | G1187 |
| TU1436 | lncRNA | downstream | 442042 | 7489445 ~ 7489881 (+) | True | G1218 |
| TU1445 | lncRNA | downstream | 450664 | 7498067 ~ 7498344 (+) | False | AMCG00003524 |
| TU1466 | lncRNA | downstream | 476458 | 7523861 ~ 7750465 (+) | True | G1241 |
| AMCG00003513 | mRNA | upstream | 4307 | 7039811 ~ 7040909 (+) | True | AMCG00003513 |
| AMCG00003507 | mRNA | upstream | 174951 | 6827929 ~ 6870265 (+) | True | AMCG00003507 |
| AMCG00003506 | mRNA | upstream | 219506 | 6818616 ~ 6825710 (+) | True | AMCG00003506 |
| AMCG00003505 | mRNA | upstream | 308846 | 6723530 ~ 6736370 (+) | True | AMCG00003505 |
| AMCG00003501 | mRNA | upstream | 398514 | 6620811 ~ 6646702 (+) | True | AMCG00003501 |
| AMCG00003523 | mRNA | downstream | 361142 | 7408545 ~ 7410129 (+) | True | AMCG00003523 |
| AMCG00003522 | mRNA | downstream | 375400 | 7422803 ~ 7438447 (+) | True | AMCG00003522 |
| AMCG00003529 | mRNA | downstream | 406008 | 7453411 ~ 7459476 (+) | True | AMCG00003529 |
| AMCG00003527 | mRNA | downstream | 419518 | 7466921 ~ 7482206 (+) | True | AMCG00003527 |
| AMCG00003524 | mRNA | downstream | 450637 | 7498040 ~ 7504015 (+) | True | AMCG00003524 |
| TU1202 | other | upstream | 550311 | 6487692 ~ 6494905 (+) | True | G1012 |
| TU1569 | other | downstream | 1601722 | 8649125 ~ 8652404 (+) | True | AMCG00003534 |
| TU1763 | other | downstream | 2208425 | 9255828 ~ 9263468 (+) | True | AMCG00003551 |
| TU1883 | other | downstream | 2730105 | 9777508 ~ 9780902 (+) | True | AMCG00003570 |
| TU2334 | other | downstream | 4442782 | 11490185 ~ 11491443 (+) | False | AMCG00003606 |
| TU2385 | other | downstream | 4526328 | 11573731 ~ 11577329 (+) | True | G1989 |
