Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003556 |
| length | 678 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 5 |
| gene id | AMCG00003556 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 9521395 ~ 9524445 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0031167 | rRNA methylation | biological_process |
| GO:0000179 | rRNA (adenine-N6,N6-)-dimethyltransferase activity | molecular_function |
| id | description |
|---|---|
| K15266 | TFB1M; dimethyladenosine transferase 1, mitochondrial |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1701 | lncRNA | upstream | 414631 | 9100618 ~ 9106764 (+) | False | AMCG00003544 |
| TU1676 | lncRNA | upstream | 493763 | 9009297 ~ 9027632 (+) | False | G1430 |
| TU1675 | lncRNA | upstream | 498822 | 9009297 ~ 9022573 (+) | True | G1430 |
| TU1677 | lncRNA | upstream | 501177 | 9009297 ~ 9020218 (+) | False | G1430 |
| TU1625 | lncRNA | upstream | 579644 | 8940151 ~ 8941751 (+) | False | AMCG00003541 |
| TU1863 | lncRNA | downstream | 176112 | 9700557 ~ 9703478 (+) | True | G1574 |
| TU2011 | lncRNA | downstream | 712411 | 10236856 ~ 10238261 (+) | True | G1706 |
| TU2056 | lncRNA | downstream | 907219 | 10431664 ~ 10457765 (+) | True | G1747 |
| TU2211 | lncRNA | downstream | 1525706 | 11050151 ~ 11050644 (+) | True | G1855 |
| TU2254 | lncRNA | downstream | 1703514 | 11227959 ~ 11228275 (+) | True | G1891 |
| AMCG00003557 | mRNA | upstream | 1999 | 9511564 ~ 9519396 (+) | True | AMCG00003557 |
| AMCG00003551 | mRNA | upstream | 258085 | 9255872 ~ 9263310 (+) | False | AMCG00003551 |
| AMCG00003547 | mRNA | upstream | 341634 | 9172738 ~ 9179761 (+) | True | AMCG00003547 |
| AMCG00003546 | mRNA | upstream | 352454 | 9165686 ~ 9168941 (+) | True | AMCG00003546 |
| AMCG00003543 | mRNA | upstream | 376437 | 9140544 ~ 9144958 (+) | True | AMCG00003543 |
| AMCG00003558 | mRNA | downstream | 13870 | 9538315 ~ 9540081 (+) | True | AMCG00003558 |
| AMCG00003562 | mRNA | downstream | 236415 | 9760860 ~ 9774097 (+) | True | AMCG00003562 |
| AMCG00003570 | mRNA | downstream | 253239 | 9777684 ~ 9781756 (+) | False | AMCG00003570 |
| AMCG00003569 | mRNA | downstream | 296482 | 9820927 ~ 9853672 (+) | True | AMCG00003569 |
| AMCG00003568 | mRNA | downstream | 341655 | 9866100 ~ 9875843 (+) | True | AMCG00003568 |
| TU1763 | other | upstream | 257927 | 9255828 ~ 9263468 (+) | True | AMCG00003551 |
| TU1569 | other | upstream | 868991 | 8649125 ~ 8652404 (+) | True | AMCG00003534 |
| TU1202 | other | upstream | 3026490 | 6487692 ~ 6494905 (+) | True | G1012 |
| TU1883 | other | downstream | 253063 | 9777508 ~ 9780902 (+) | True | AMCG00003570 |
| TU2334 | other | downstream | 1965740 | 11490185 ~ 11491443 (+) | False | AMCG00003606 |
| TU2385 | other | downstream | 2049286 | 11573731 ~ 11577329 (+) | True | G1989 |
| TU2685 | other | downstream | 3512992 | 13037437 ~ 13042597 (+) | True | AMCG00003648 |
| TU2754 | other | downstream | 3630615 | 13155060 ~ 13156627 (+) | False | AMCG00003655 |
