Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003674 |
| length | 714 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 4 |
| gene id | AMCG00003674 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 14329530 ~ 14335669 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0060034 | notochord cell differentiation | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2884 | lncRNA | upstream | 250203 | 14079112 ~ 14079327 (+) | True | G2380 |
| TU2832 | lncRNA | upstream | 788376 | 13539972 ~ 13541154 (+) | True | G2336 |
| TU2830 | lncRNA | upstream | 814465 | 13514660 ~ 13515065 (+) | True | G2334 |
| TU2829 | lncRNA | upstream | 816532 | 13512600 ~ 13512998 (+) | True | G2333 |
| TU2828 | lncRNA | upstream | 816999 | 13512194 ~ 13512531 (+) | True | G2332 |
| TU2960 | lncRNA | downstream | 85062 | 14420731 ~ 14421310 (+) | True | G2446 |
| TU3032 | lncRNA | downstream | 516083 | 14851752 ~ 14866698 (+) | True | AMCG00003690 |
| TU3058 | lncRNA | downstream | 670677 | 15006346 ~ 15030368 (+) | True | G2517 |
| TU3118 | lncRNA | downstream | 778960 | 15114629 ~ 15114837 (+) | True | G2563 |
| TU3119 | lncRNA | downstream | 780036 | 15115705 ~ 15116972 (+) | True | G2564 |
| AMCG00003672 | mRNA | upstream | 845 | 14299567 ~ 14328685 (+) | True | AMCG00003672 |
| AMCG00003671 | mRNA | upstream | 36767 | 14233934 ~ 14292763 (+) | True | AMCG00003671 |
| AMCG00003676 | mRNA | upstream | 106626 | 14220132 ~ 14222904 (+) | True | AMCG00003676 |
| AMCG00003675 | mRNA | upstream | 125130 | 14191868 ~ 14204400 (+) | True | AMCG00003675 |
| AMCG00003673 | mRNA | upstream | 139432 | 14092013 ~ 14190098 (+) | True | AMCG00003673 |
| AMCG00003679 | mRNA | downstream | 30647 | 14366316 ~ 14382592 (+) | True | AMCG00003679 |
| AMCG00003680 | mRNA | downstream | 49469 | 14385138 ~ 14388550 (+) | True | AMCG00003680 |
| AMCG00003678 | mRNA | downstream | 72760 | 14408429 ~ 14416083 (+) | True | AMCG00003678 |
| AMCG00003683 | mRNA | downstream | 204875 | 14540544 ~ 14548128 (+) | True | AMCG00003683 |
| AMCG00003681 | mRNA | downstream | 220321 | 14555990 ~ 14558193 (+) | True | AMCG00003681 |
| TU2754 | other | upstream | 1172903 | 13155060 ~ 13156627 (+) | False | AMCG00003655 |
| TU2685 | other | upstream | 1286933 | 13037437 ~ 13042597 (+) | True | AMCG00003648 |
| TU2385 | other | upstream | 2752201 | 11573731 ~ 11577329 (+) | True | G1989 |
| TU2334 | other | upstream | 2838087 | 11490185 ~ 11491443 (+) | False | AMCG00003606 |
| TU1883 | other | upstream | 4548628 | 9777508 ~ 9780902 (+) | True | AMCG00003570 |
| TU2954 | other | downstream | 82847 | 14418516 ~ 14419732 (+) | True | G2440 |
| TU3283 | other | downstream | 1699994 | 16035663 ~ 16039640 (+) | False | AMCG00003712 |
| TU3719 | other | downstream | 3346148 | 17681817 ~ 17683988 (+) | True | G3047 |
| TU3792 | other | downstream | 3802086 | 18137755 ~ 18142633 (+) | True | AMCG00003779 |
| TU3794 | other | downstream | 3810991 | 18146660 ~ 18152314 (+) | True | G3108 |
