RNA id: AMCG00004608



Basic Information


Item Value
RNA id AMCG00004608
length 618
RNA type mRNA
GC content 0.59
exon number 9
gene id AMCG00004608
representative False

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 54744714 ~ 54765829 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACTGCGACACCAAACACGTCCTGCTTCTCGACGGTGCGGCTCGTCTTCCTGGCAGtTGCCATGGAAACAGTGCTGCTCTTCTTCTGCTCCTTGCTGGTCTACGTGGCTGGTAGCTATCACCCCCCCAGACTGAGtgtgggactGGCCACAGTGTCTCCCAGGTACCCAGTTTGTTCTGATGAGCTGGAGGAATGTAGTGCTTCTCTCCTGGATGCTAATGATGTCACAGcTGTAGCGGACCCCAGTGGACAGGATTATGAGAGCCTGCGAATCGGAGGGCTGGTGTTTGCAGTGGTGCTCTTCACTCTCGGCATCCTCCTCATCCTCAGCAGACGATGCCGCTGCAGCTTCAACCAGAAGCCCAGGGCCCCAGGAGACGAGGAGGCACAGGCAGAAAATCTCATCACCTCCAACGAGCCTCGACCAGCTGTGGGTCCCAGTGGccTGAAGCCCAACACAGAGCCACCACGGACCCACGACATGACTGATGATGCGATGCTGACTGAAGCTTcccgagagaaagagagggagaaggagggggagagagagagggaagaggagtGTGTCAGAgccggggggagggggggcggcTGCAGCCTCGGCTCTGTCCTGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU11694 lncRNA upstream 40488 54699816 ~ 54704226 (+) True G9435
TU11680 lncRNA upstream 69804 54668228 ~ 54674910 (+) True G9423
TU11640 lncRNA upstream 133371 54608900 ~ 54611343 (+) True G9399
TU11649 lncRNA upstream 142977 54600618 ~ 54601737 (+) False AMCG00004604
TU11600 lncRNA upstream 269874 54470018 ~ 54474840 (+) True AMCG00004595
TU11703 lncRNA downstream 5783 54768610 ~ 54778901 (+) False AMCG00004609
TU11704 lncRNA downstream 20919 54783746 ~ 54789191 (+) False AMCG00004610
TU11726 lncRNA downstream 39150 54801977 ~ 54802435 (+) True G9464
TU11808 lncRNA downstream 297263 55060090 ~ 55060304 (+) True G9521
TU11811 lncRNA downstream 327554 55090381 ~ 55090641 (+) True G9524
AMCG00004606 mRNA upstream 1709 54724756 ~ 54743005 (+) True AMCG00004606
AMCG00004604 mRNA upstream 115495 54623588 ~ 54629219 (+) True AMCG00004604
AMCG00004601 mRNA upstream 172970 54564095 ~ 54571744 (+) True AMCG00004601
AMCG00004602 mRNA upstream 224056 54515030 ~ 54520658 (+) True AMCG00004602
AMCG00004603 mRNA upstream 231075 54495757 ~ 54513639 (+) True AMCG00004603
AMCG00004609 mRNA downstream 5825 54768652 ~ 54778903 (+) True AMCG00004609
AMCG00004610 mRNA downstream 20964 54783791 ~ 54789762 (+) True AMCG00004610
AMCG00004611 mRNA downstream 55775 54818602 ~ 54827192 (+) True AMCG00004611
AMCG00004617 mRNA downstream 121234 54884061 ~ 54894951 (+) True AMCG00004617
AMCG00004613 mRNA downstream 133038 54895865 ~ 54913735 (+) True AMCG00004613
TU11698 other upstream 10032 54727808 ~ 54734682 (+) False AMCG00004606
TU11647 other upstream 115507 54600618 ~ 54629207 (+) False AMCG00004604
TU11514 other upstream 349414 54394791 ~ 54395300 (+) True G9300
TU11498 other upstream 390769 54353182 ~ 54353945 (+) False AMCG00004588
TU11499 other upstream 391994 54350957 ~ 54352720 (+) False AMCG00004588
TU11809 other downstream 311219 55074046 ~ 55074459 (+) True G9522
TU11820 other downstream 364851 55127678 ~ 55128052 (+) True G9532
TU11961 other downstream 828539 55591366 ~ 55592720 (+) False AMCG00004644
TU12050 other downstream 1036062 55798889 ~ 55799931 (+) False AMCG00004650
TU12267 other downstream 1775427 56538254 ~ 56542063 (+) True G9889

Expression Profile