RNA id: TU69693


Basic Information

Item Value
RNA id TU69693
length 631
RNA type TUCP
GC content 0.43
exon number 3
gene id AMCG00009265
representative False

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 30599474 ~ 30657612 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTTCAGTCTTACAGCAGGAATTATGTCTTTCAGATGCCAAACaataatcatgtatttaattttattcttaagcctctgtttgtgttttggacAAGGAATATCAATAACAGcaacaacaactgcaGATCCCAGTACCACAACTGCAGATCCTACTACCACAACTGCAGATCCCACTACCACAACTTCAGATCCTACAACCGCAAATGATGATCctactaccaccacaactgaatcTCCCTCTACCACAAACACAGTTTACCCTACtaacacaactgcagctccgACTACcactacaactgcagctccaactaCTACAGCAACACCAGCTACTACTAACACTCCTACTACTACAATGGTCACAAAGCTTGACTCTGTGAACAATCTGACAGCCAGTAACATCAGCACAACATCCATAGCCCTTAGCTGGAGTGCACCATCTGAAAATGCAGGGAGGTATAGAGTTGAAGCCATTGGACCTACTGTTACAAACTTCACAGTGAACACATTATCAACTGAAATAACTGGACTTGTACCTGGAAGCAATTATACACTGTGGGTTATTGCTGTGGCTGCAGACAATGTTACTGAAGGAGCTCCAGTGACCATAACTGTGTTCACAAGTGAGTTGCTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU69654 lncRNA downstream 110599 30491238 ~ 30491980 (-) True G55722
TU69634 lncRNA downstream 119206 30480779 ~ 30483373 (-) True G55703
TU69564 lncRNA downstream 366184 30236159 ~ 30236395 (-) True G55648
TU69515 lncRNA downstream 611769 29989899 ~ 29990810 (-) False AMCG00009235
TU69510 lncRNA downstream 626310 29975629 ~ 29976269 (-) True G55610
TU69824 lncRNA upstream 151964 30809576 ~ 30816091 (-) True G55861
TU69967 lncRNA upstream 1257556 31915168 ~ 31915373 (-) True G55975
TU69990 lncRNA upstream 1292810 31950422 ~ 31950673 (-) True G55991
TU70018 lncRNA upstream 1340465 31998077 ~ 32031970 (-) True G56012
TU70199 lncRNA upstream 2142923 32800535 ~ 32800895 (-) True G56163
AMCG00009262 mRNA downstream 34885 30561748 ~ 30567694 (-) True AMCG00009262
AMCG00009253 mRNA downstream 54758 30544153 ~ 30547821 (-) True AMCG00009253
AMCG00009254 mRNA downstream 60284 30536850 ~ 30542295 (-) True AMCG00009254
AMCG00009255 mRNA downstream 86803 30493660 ~ 30515776 (-) True AMCG00009255
AMCG00009241 mRNA downstream 346080 30250054 ~ 30256499 (-) False AMCG00009241
AMCG00009266 mRNA upstream 36087 30693699 ~ 30696595 (-) True AMCG00009266
AMCG00009267 mRNA upstream 144133 30801745 ~ 30803630 (-) True AMCG00009267
AMCG00009261 mRNA upstream 238363 30895975 ~ 30905764 (-) True AMCG00009261
AMCG00009263 mRNA upstream 249256 30906868 ~ 30917622 (-) True AMCG00009263
AMCG00009270 mRNA upstream 289686 30947298 ~ 30970858 (-) True AMCG00009270
TU69579 other downstream 348096 30249871 ~ 30254483 (-) True AMCG00009241
TU69394 other downstream 932242 29660960 ~ 29670337 (-) True AMCG00009229
TU69243 other downstream 1539549 29058284 ~ 29063030 (-) False AMCG00009215
TU68783 other downstream 2984490 27613598 ~ 27618089 (-) True AMCG00009165
TU68523 other downstream 3805925 26793541 ~ 26796654 (-) True G54821
TU69850 other upstream 276952 30934564 ~ 30937251 (-) True G55878
TU69860 other upstream 286755 30944367 ~ 30947211 (-) True G55881
TU69861 other upstream 315341 30972953 ~ 30985995 (-) True AMCG00009269
TU69876 other upstream 507399 31165011 ~ 31184966 (-) True AMCG00009275
TU70548 other upstream 3569662 34227274 ~ 34229389 (-) False AMCG00009342

Expression Profile