Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00009529 |
| length | 543 |
| RNA type | mRNA |
| GC content | 0.63 |
| exon number | 3 |
| gene id | AMCG00009529 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 40436327 ~ 40441597 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0031225 | anchored component of membrane | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0043395 | heparan sulfate proteoglycan binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU71954 | lncRNA | upstream | 92946 | 40339382 ~ 40343381 (+) | True | G57544 |
| TU71932 | lncRNA | upstream | 276701 | 40159409 ~ 40159626 (+) | True | G57523 |
| TU71839 | lncRNA | upstream | 402994 | 40030546 ~ 40033333 (+) | True | G57457 |
| TU71800 | lncRNA | upstream | 493291 | 39941222 ~ 39943036 (+) | True | G57428 |
| TU71769 | lncRNA | upstream | 561157 | 39874881 ~ 39875170 (+) | True | G57401 |
| TU72028 | lncRNA | downstream | 387475 | 40829072 ~ 40829677 (+) | True | G57597 |
| TU72030 | lncRNA | downstream | 491370 | 40932967 ~ 40933210 (+) | True | G57599 |
| TU72136 | lncRNA | downstream | 1058367 | 41499964 ~ 41500218 (+) | True | G57690 |
| TU72199 | lncRNA | downstream | 1154632 | 41596229 ~ 41599122 (+) | True | AMCG00009563 |
| TU72228 | lncRNA | downstream | 1307958 | 41749555 ~ 41750144 (+) | True | G57770 |
| AMCG00009530 | mRNA | upstream | 15455 | 40412213 ~ 40420872 (+) | True | AMCG00009530 |
| AMCG00009524 | mRNA | upstream | 215958 | 40212648 ~ 40220369 (+) | True | AMCG00009524 |
| AMCG00009525 | mRNA | upstream | 233214 | 40189141 ~ 40203113 (+) | True | AMCG00009525 |
| AMCG00009514 | mRNA | upstream | 257277 | 40172966 ~ 40179050 (+) | True | AMCG00009514 |
| AMCG00009515 | mRNA | upstream | 294047 | 40140469 ~ 40142280 (+) | True | AMCG00009515 |
| AMCG00009526 | mRNA | downstream | 7222 | 40448819 ~ 40462899 (+) | True | AMCG00009526 |
| AMCG00009533 | mRNA | downstream | 165539 | 40607136 ~ 40608113 (+) | True | AMCG00009533 |
| AMCG00009534 | mRNA | downstream | 202797 | 40644394 ~ 40652818 (+) | True | AMCG00009534 |
| AMCG00009535 | mRNA | downstream | 236256 | 40677853 ~ 40694380 (+) | True | AMCG00009535 |
| AMCG00009536 | mRNA | downstream | 263929 | 40705526 ~ 40711491 (+) | True | AMCG00009536 |
| TU71881 | other | upstream | 331379 | 40102383 ~ 40104948 (+) | False | AMCG00009516 |
| TU71802 | other | upstream | 487127 | 39948006 ~ 39949200 (+) | True | G57430 |
| TU71670 | other | upstream | 999332 | 39434900 ~ 39436995 (+) | True | AMCG00009480 |
| TU71381 | other | upstream | 1978735 | 38442255 ~ 38457592 (+) | True | G57105 |
| TU71113 | other | upstream | 2820044 | 37610343 ~ 37616283 (+) | False | AMCG00009428 |
| TU72035 | other | downstream | 549205 | 40990802 ~ 40994659 (+) | True | G57604 |
| TU72303 | other | downstream | 1594421 | 42036018 ~ 42078241 (+) | True | G57830 |
| TU72919 | other | downstream | 3491355 | 43932952 ~ 43935762 (+) | True | G58324 |
| TU73161 | other | downstream | 3944900 | 44386497 ~ 44387964 (+) | False | G58522 |
| TU73232 | other | downstream | 4125768 | 44567365 ~ 44570531 (+) | True | AMCG00009694 |
