Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00009632 |
| length | 1119 |
| RNA type | mRNA |
| GC content | 0.63 |
| exon number | 1 |
| gene id | AMCG00009632 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 43051273 ~ 43052391 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0071805 | potassium ion transmembrane transport | biological_process |
| GO:0034765 | regulation of ion transmembrane transport | biological_process |
| GO:0051260 | protein homooligomerization | biological_process |
| GO:0008076 | voltage-gated potassium channel complex | cellular_component |
| GO:0005251 | delayed rectifier potassium channel activity | molecular_function |
| id | description |
|---|---|
| K04891 | KCND1, KV4.1; potassium voltage-gated channel Shal-related subfamily D member 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72699 | lncRNA | upstream | 41223 | 43006624 ~ 43010050 (+) | True | G58148 |
| TU72700 | lncRNA | upstream | 41271 | 43006601 ~ 43010002 (+) | False | G58148 |
| TU72671 | lncRNA | upstream | 112399 | 42938007 ~ 42938874 (+) | True | G58123 |
| TU72524 | lncRNA | upstream | 414820 | 42629539 ~ 42636453 (+) | True | G58008 |
| TU72499 | lncRNA | upstream | 573161 | 42477715 ~ 42478112 (+) | True | G57987 |
| TU72734 | lncRNA | downstream | 160319 | 43212710 ~ 43213028 (+) | True | G58178 |
| TU72753 | lncRNA | downstream | 197012 | 43249403 ~ 43249641 (+) | True | G58195 |
| TU72776 | lncRNA | downstream | 257469 | 43309860 ~ 43311062 (+) | True | G58215 |
| TU72773 | lncRNA | downstream | 266525 | 43318916 ~ 43324579 (+) | True | G58214 |
| TU72836 | lncRNA | downstream | 387008 | 43439399 ~ 43444317 (+) | False | AMCG00009647 |
| AMCG00009631 | mRNA | upstream | 47951 | 42977129 ~ 43003322 (+) | True | AMCG00009631 |
| AMCG00009626 | mRNA | upstream | 78895 | 42960967 ~ 42972378 (+) | True | AMCG00009626 |
| AMCG00009628 | mRNA | upstream | 124216 | 42914780 ~ 42927057 (+) | True | AMCG00009628 |
| AMCG00009627 | mRNA | upstream | 137781 | 42891698 ~ 42913492 (+) | True | AMCG00009627 |
| AMCG00009625 | mRNA | upstream | 162782 | 42887108 ~ 42888491 (+) | True | AMCG00009625 |
| AMCG00009633 | mRNA | downstream | 53088 | 43105479 ~ 43112950 (+) | True | AMCG00009633 |
| AMCG00009636 | mRNA | downstream | 137214 | 43189605 ~ 43213919 (+) | True | AMCG00009636 |
| AMCG00009639 | mRNA | downstream | 199811 | 43252202 ~ 43253062 (+) | True | AMCG00009639 |
| AMCG00009634 | mRNA | downstream | 206129 | 43258520 ~ 43266899 (+) | True | AMCG00009634 |
| AMCG00009635 | mRNA | downstream | 215536 | 43267927 ~ 43273372 (+) | True | AMCG00009635 |
| TU72303 | other | upstream | 973032 | 42036018 ~ 42078241 (+) | True | G57830 |
| TU72035 | other | upstream | 2056614 | 40990802 ~ 40994659 (+) | True | G57604 |
| TU71881 | other | upstream | 2946325 | 40102383 ~ 40104948 (+) | False | AMCG00009516 |
| TU71802 | other | upstream | 3102073 | 39948006 ~ 39949200 (+) | True | G57430 |
| TU71670 | other | upstream | 3614278 | 39434900 ~ 39436995 (+) | True | AMCG00009480 |
| TU72919 | other | downstream | 880561 | 43932952 ~ 43935762 (+) | True | G58324 |
| TU73161 | other | downstream | 1334106 | 44386497 ~ 44387964 (+) | False | G58522 |
| TU73232 | other | downstream | 1514974 | 44567365 ~ 44570531 (+) | True | AMCG00009694 |
| TU73244 | other | downstream | 1532171 | 44584562 ~ 44599328 (+) | False | AMCG00009700 |
| TU73251 | other | downstream | 1580359 | 44632750 ~ 44651967 (+) | True | G58600 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000010_08187103_08253432.mRNA | True | 2570 | mRNA | 0.50 | 8 | CI01000010 | 8187061 ~ 8253953 (-) |
