RNA id: AMCG00011363



Basic Information


Item Value
RNA id AMCG00011363
length 582
RNA type mRNA
GC content 0.37
exon number 2
gene id AMCG00011363
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 19956472 ~ 19957634 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACAACTATCCCGAAATCTCTATGTAATAGTCCCATCAAAGAGAATGTTACTGTAGATACGGTAATAGCAATTATTGGTGTAAGCGATAGCGATTCAGGTGAAAATGGAAAAGCCGACCTTAAAATGTCAGcagtattacattttacactcCAGAAATCGTCTGAAGATTATTACTCACTGATTATATTGGAACCTTTAAATCGGCAGAAAGTTCTGGACTATAATATTACTCTTATAGCTCCAGACATGGGCTCCACTTTTTTATCtagtaataaaacaatcacattaGAACTACTTGACGTCAAAGACAACCGTCCTCTGTTTCCAAATACTTTCTATACAAGTTCAATCATGGAAAATAAAGCACCTGGAGCTGTGTTAAGTTCTGTAACAACAGTCAATCCAGATATTAATGAAAATAGATATCTCGTCTATTCCAttattgaaaaagaaatAGTCTCggaaaggaaacatttttgtCAGACAACCTGCACCAAACGGGTCTGGATACATCGTGTCCAATATACCGAGGAGTACAGGGATGACAGAAACAAGTACTTCAGCCAATTCAACACTGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU132698 lncRNA upstream 152997 19803171 ~ 19803475 (+) True G106071
TU132641 lncRNA upstream 367499 19588193 ~ 19588973 (+) True G106022
TU132421 lncRNA upstream 1339407 18616850 ~ 18617065 (+) True G105858
TU132361 lncRNA upstream 1708704 18175355 ~ 18247768 (+) True G105811
TU132340 lncRNA upstream 1923447 18032755 ~ 18033025 (+) True G105794
TU132783 lncRNA downstream 20613 19978247 ~ 20014348 (+) True G106138
TU132777 lncRNA downstream 29570 19987204 ~ 19995987 (+) False G106134
TU132784 lncRNA downstream 158337 20115971 ~ 20162966 (+) False G106139
TU132984 lncRNA downstream 657804 20615438 ~ 20615641 (+) True G106277
TU133009 lncRNA downstream 949816 20907450 ~ 20907653 (+) True G106298
AMCG00011361 mRNA upstream 1385 19954620 ~ 19955087 (+) True AMCG00011361
AMCG00011359 mRNA upstream 37283 19914612 ~ 19919189 (+) True AMCG00011359
AMCG00011360 mRNA upstream 46879 19902161 ~ 19909593 (+) True AMCG00011360
AMCG00011358 mRNA upstream 58214 19889328 ~ 19898258 (+) True AMCG00011358
AMCG00011353 mRNA upstream 68842 19842173 ~ 19887630 (+) True AMCG00011353
AMCG00011364 mRNA downstream 29615 19987249 ~ 19995970 (+) True AMCG00011364
AMCG00011365 mRNA downstream 365416 20323050 ~ 20339325 (+) True AMCG00011365
AMCG00011373 mRNA downstream 780748 20738382 ~ 20739024 (+) True AMCG00011373
AMCG00011374 mRNA downstream 997160 20954794 ~ 20958447 (+) True AMCG00011374
AMCG00011380 mRNA downstream 1169476 21127110 ~ 21131535 (+) True AMCG00011380
TU132491 other upstream 734051 19222055 ~ 19222421 (+) True G105916
TU132460 other upstream 839103 19112910 ~ 19117369 (+) True AMCG00011328
TU132321 other upstream 2168422 17784163 ~ 17788050 (+) True G105778
TU132132 other upstream 2974231 16978492 ~ 16982241 (+) True AMCG00011293
TU131803 other upstream 3972393 15963340 ~ 15984079 (+) True G105373
TU132810 other downstream 137595 20095229 ~ 20162966 (+) False G106139
TU132789 other downstream 154446 20112080 ~ 20162966 (+) True G106139
TU132801 other downstream 160941 20118575 ~ 20162966 (+) False G106139
TU132823 other downstream 338377 20296011 ~ 20339087 (+) False AMCG00011365
TU132939 other downstream 403574 20361208 ~ 20367223 (+) True G106242

Expression Profile