RNA id: AMCG00019093


Basic Information

Item Value
RNA id AMCG00019093
length 744
RNA type mRNA
GC content 0.65
exon number 2
gene id AMCG00019093
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2758100 ~ 2759745 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ACCCGGGAGTCTGCTTTCGTCCACGCCATCGCCTCAGCCGGCGTGGCATTCGCGGTGACGCGCTCCTGCGCAGAAGGCTCGGCCACCATCTGCGGCTGCGACACCCGGCACAAGGGCGCCCCCGGGGAGGGCTGGAAGTGGGGTGGCTGCAGCGAGGACGCCGAGTTCGGGAGCATGGTGTCACGGGAGTTCGCGGACGCTCGGGAGAACCGACCTGACGCCCGCTCCGCCATGAACCGCCACAACAACGAGGCCGGGCGCACGTCCATTAACGACCACCTGCACCTCAAGTGCAAGTGCCACGGGCTCTCGGGCAGCTGCGAGGTGAAGACCTGCTGGTGGTCTCAGCCCGACTTCCGTGTGATCGGGGACTACCTGAAGGACAAGTACGACAGCGCCTCGGAGATGGTGGTGGAGAAGCACCGTGAGTCCCGGGGCTGGGTGGAGACGCTCCGGCCCAAGTTCACCTTCTTCAAGCCTCCAACGGAGCGGGATCTGGTCTACTACGAGAGCTCGCCCAACTTCTGCGAGCCCAACCAGGAGACGGGCTCGTTCGGGACCCGGGACCGCGTCTGCAACGTGACGTCCCACGGCATCGATGGCTGCGACCTGCTGTGCTGCGGCCGTGGCCACAACACGAGGACTGAGAAGCGCAAGGAGAAGTGCCACTGCATCTTCCACTGGTGCTGCTATGTCAGCTGCCAGGAGTGCGTGCGCGTCTACGACGTCCACACCTGCAAGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU39249 lncRNA downstream 119980 2635184 ~ 2638120 (-) True G31329
TU39218 lncRNA downstream 186812 2566801 ~ 2571288 (-) True G31300
TU39214 lncRNA downstream 195306 2561475 ~ 2562794 (-) True G31296
TU39128 lncRNA downstream 248943 2502108 ~ 2509157 (-) False G31246
TU39269 lncRNA upstream 94703 2854448 ~ 2856659 (-) True G31346
TU39287 lncRNA upstream 336964 3096709 ~ 3097340 (-) True G31363
TU39319 lncRNA upstream 428982 3188727 ~ 3190187 (-) True G31390
TU39328 lncRNA upstream 451659 3211404 ~ 3211605 (-) True G31399
TU39363 lncRNA upstream 585112 3344857 ~ 3345240 (-) True G31431
AMCG00019091 mRNA downstream 71927 2676315 ~ 2686173 (-) True AMCG00019091
AMCG00019092 mRNA downstream 100556 2638500 ~ 2657544 (-) True AMCG00019092
AMCG00019087 mRNA downstream 232971 2520913 ~ 2525129 (-) True AMCG00019087
AMCG00019085 mRNA downstream 273361 2471464 ~ 2484739 (-) True AMCG00019085
AMCG00019084 mRNA downstream 324025 2409940 ~ 2434075 (-) True AMCG00019084
AMCG00019094 mRNA upstream 9035 2768780 ~ 2785358 (-) True AMCG00019094
AMCG00019097 mRNA upstream 318145 3077890 ~ 3094196 (-) True AMCG00019097
AMCG00019098 mRNA upstream 391085 3150830 ~ 3168130 (-) True AMCG00019098
AMCG00019102 mRNA upstream 412003 3171748 ~ 3173436 (-) True AMCG00019102
AMCG00019103 mRNA upstream 538593 3298338 ~ 3300086 (-) True AMCG00019103
TU38988 other downstream 579450 2177980 ~ 2178650 (-) True G31130
TU38924 other downstream 674829 1955668 ~ 2083271 (-) True G31082
TU38923 other downstream 674829 2038647 ~ 2083271 (-) False G31082
TU38861 other downstream 1047557 1705899 ~ 1710543 (-) False G31035
TU38662 other downstream 1434504 1321614 ~ 1323596 (-) True AMCG00019034
TU39603 other upstream 2173093 4932838 ~ 4935996 (-) False AMCG00019129
TU41485 other upstream 10902371 13662116 ~ 13665230 (-) True G33106
TU41559 other upstream 11732146 14491891 ~ 14492218 (-) True G33163
TU41560 other upstream 11732146 14491891 ~ 14558290 (-) False G33163
TU41680 other upstream 12192097 14951842 ~ 14991996 (-) True G33259

Expression Profile