RNA id: AMCG00021697


Basic Information

Item Value
RNA id AMCG00021697
length 7505
RNA type mRNA
GC content 0.40
exon number 24
gene id AMCG00021697
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 25922202 ~ 25943386 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGAGAAGACAGGAGAGGTTGCAGAAAATCAGCGCTGTGTTTTTATcgtaaaaatacaatacaattagaGGGAATTATAGAAGAAACGGAGTTGGAACGGCAGTAGCTATATAATAAACATGGACCCGTTTACGGAGAAACTGCTCGAACGCACTCGAGCCCGCAGAGAGAATCTGCAGAAGAAGATGGCCGAGAGACCTACAGCAGCCAGCCGGCAAATATCGAAAAGAACCAGGGAGCCTCTCGCTGAAACTAACACCTTGACCGAGCGGCCAACAGAGGAAGttCAAGCCTCCACTAAGCCATCTCCATCTAAAAGAAGGTGTTCTGATAACAAAGAGGTGCCAGCCACAGGTGAAGAGAACAGGCAGCCTGTATCACCTGATTCAATGCTTAAGCCATTGGAAATGGATAAAAAGCCTCCAATACCTCTTGTTAGCAATACTTTGCAGCCAGCCTTGTCTTCTGAAAAGGAAGGCGTTGAATTGAATACACCAATACCAGCTGGTATCTCCTTAAAGTCCCGAATGCATAAGCTGGCAGAGAAAAGGCAGTGCTGGGATAACAATGATGCTGTTTTAGATGCAGATGTTTCACCTATCAAGACACAAAGCCAAAAAGCTTCTCTTCCCATCCAGTCTCCAATGTCTGTGTCTTCTGAGCCTCCATTAGGAAGGAAAGGCAGATTTGCCAACCTTGCAGCAACTATTGGCTCATGGGAAGATGACCTAAGTCACCCCTCTGTGAAGCCAAACAATGCACAAGTGCAGCCTGGCACCACTTGTTTATCAAAACCATCCGCTACCAATGGAGCATCTGCTGGTGTGAGCAGCAACAGAGCAACCCCAAACACTGCATCGTATTCTCAAAAGACTGCTGAAGCATCAGTGAATAAGCCTGTCCTCTCTGCTCAACAGAGTTCTATTAATTTTTCGGGTCAGTCAACAAGAGTTGTTTCATCAAGTCCTCAAAAAACTGAGAAGGCCGAAGCCCCCTCTGCTCTGCGAGCTGGGAGAGCGGTCCCGTCCAGCCCTCAGAGAGTAAATCAATCATCCACTCAACTTACTCTGCAGGCGGGGAGATCTATTACTTCGAGCTCCCAGAAATCAAACCTACCACCCCAACAGGCTGCACTGCCTTCTGGCAGAGTAATTTCATCTAGTCCTCAGAAAAAAGATTTGGGGAGGCTTCATTCCCCAAGTCCTCAGAAAGCCCAGCTACCCAAAGAACACCTAGCGTTCCAGGCAGGGAAACCAGCATTGTCTAATCTGAAGCAGACGGAGGCCACCTCTCTGCTAACCAAAGCAACTTTGAGTCTCCAGACCAGGGAACAATTCACCAAAGAATACACAGTGCAGCAGAAAAGCCCGGCAGTCACACCAGGTGGATCTGGTGTCAAATCGTTCCTGGAGCGTTTTGGAGAGCGGTGCCAAGAGCGCTCAAACAAGAGTCCAGCTTCAGGTACTCAGGCACTTGGAACTTCCACAGTCACTCCGAACACAAAGCTGGTTCAAGACAGGCTGAAGTCACCTCAGCTGTCCACTGCAACTGCAGACCTTACTCAGAAGCAGAAACAGGAACGTGAAAAAGAACTTGCCTTGATACGGAATCGCTTCCAGAAGGGGAATATGTGGAAAAGTGACAATGAAACTTCACACACAAAGGAACTACAAAATAAGGAGACTACAGATGGACATTCAGATCAACTTGTTCCACAGACCGAGTGTAAGCTGGCCTCTCTCCCTGTCAAAGTCAACGATTCAAACCATTCATCTTTAAAGCCTTCAGTCTCGAGTTCTGTGGgcTTTCTGAAAAAGGATGCGGTTGTCAGTAATTCAAAGTCCAGTCCTTTGAAGAAAGTTGCATTCTCGGTGAATGAGAGGGACACATCCGAGTCTCTAGAAGACCAAAAAGTAGAGGAAGATGCGCATACCTtgGAGGTTGTTCGTGAGGTAGAGATGGCTGTGGATGAGGAGGTCAACAGCTCTGGGGTAATTGATGAGCTCTTTGACGGAGTTGTGGAAGAACCTGAAGAGCCAGCTCGGCAAGACCCTGAGGTGAAAAGGTCTAAGAATGAGCAGCTGGAAGGACCTGATGAGATAGACGAAACTGGTGGTGATGAGGATCCCCTGAATATTTCTTCAATGTCTCTGCTCACCCCCCTGGCAGAAACTGTGGCTTCTACAGTAACAAGTCCAGAGATGTATACTCCAACCAGCACAGTTAATGAAAGCAACAATACACCTGATGGGCAAAGAGCCACCAGGTTCCAAAGGGCCAGAGTTCGCCGTGCAGAGTCTATTGACAGCATTGACTCTGTGGCTGATGACTATAACCTGCTGTACAGTATTGATGCTTATAGATCAACCAGAGTGAAGGAAGCTGATCGTCCGCATGTTAAGCAAGTGATAGTCCGTAAAGAAGACGTTTCCCGAAAGCAAGACAACGGCAGGGATGCTGGTCAAGTGAATATCAAACAGaaaattaagATTTTCAATAATGAGATAAATATGCAGCAGACCGTGATTCACCAGGCCAGTCAAGCTCTTAACTGCTGTGTGGATGAGGATCATGGCAAAGGCTCTCAAGTCGAGGCTGAGGCCGAGAGGCTTCTTCTCATTGCCACTGAGAGAAGATTGGCTTTCATGAAAGAGCTGAATAGACTGAAAGGTGAAGGCCCATCAGGCCAGAAGAAGGGTCCCAGTACCTCTAAAGCACACGATGGCAGTCCCTCAGCCTCGACAGGATCAGTGTCTCTGTTTGAGCTACGCCTTCCTCTGAaagcagattttgtttgttcattgaCAAAGAAACCAGAATCTGcaaactattattttttcctaatGGTCCGAGCCGGGGCTGAAAATACAGTGGCAACACCCTTAACCAGTACCCAGAATGCTTTGAGTGGAGATGCACTCACGTTTCCAACTAAATTCACACTTCCCGATGTCTCAAACGACTTTGAAATAGATGTTGAGGTTTATTGCTTGGTCCAAAAGCAGGAAATACCATCTGACAAGCGGAAGAAGACTAGTAAAGCcaagggAATTACCCCCAAGCGTCTCCTCACTTCAATTACAaAAAGCAACCTTCATACTCCAgTCATGGCTAGTCCAGGAGGTCCTAATGCTGTTCGCACCAGTAATTTTGTCCTTGTTGGAGCACACAAACTGACTCTGGCATctattggaaaaaacaaatttaCTCTTGATCAGGTACCGTTTTTGTGCCCTCTGGAAggtcatatttatttgaaacttcAGTGTCAGGTGGGGTCATCAATTGAAGAAAGAGGCTTTTTGACGATGTTTGAAGATGTCAGTGGGTTCGGAGCTTGGCACAGAAGGTGGTGTGTTCTCTCAGGGTACTGCATCTCTTACTGGACTTACCCAGATGATGAGAAGCGCAAGAATCCAATTGGTCGAATAAATCTGGCCAATTGCACCAGCAGGAGGATTGAGCCGGCGAATCGCGAGTTCTGTGCCAGGCCCAATACCTTCGAGCTGGTCACCGTCCGACCCCAGCAAGAGGAAGACAAGGAGACTCTAGTCAGCCAGTGTAGGAATACGCTGTGTGTTACCAAGAATTGGCTGAGCGCAGACACTAAGGATGAGCGTAATCTGTGGATGCAGACTCTAAACCAGGTTTTAGTTGATCTTCGCATGTGGCAGCCTGACTCCTGCTACAGGCCTGTGTGAAGATGCAGACTGGGCAGCTAAGGAAGAAAAGACTTTCTTGTATTaaattgggggggaaaaatatgCCTACAATGCCATTTAACCTTTTTAAATTCAAGATATGTGCAATGAATCAAATCTTATAGGTAGttattaaagaaaaattaaaGGCAATTAAAAATACTTGTTCTTAAAGAATTTCAAATCGTGAACACtgttttaagataaaaaaatatatatattaaaacggAAAAACCATGACTGACAAATTACGGTTATCCTTACCAGACTGATATCAATTAGAGATGCAGTGTGAGGACCCCACCAGTCGTGTTGTCAGTCTGAAGTCGCTGAGTTATCCTGATCAGGTGTAAATCCCCTGAGACACCCCAGCACCTGGTATGTGGGAATTGCAGCTCTCCTGTCCTTCATGGCTGATAGGGTATCTGGGTACAGTGAGATTTTAGTGTATTAAATGATCATTCTCTCCAGTTAGAGAGCTCTAAGTATGAACACGAGtccctgtttttattaaaatagagTAACTTGCAAACTAAAGCACTCTTCTCTGCATTGGTTTAAAATTGTCCTGGAATACTCCAAAATCACCTAAATGAATTATCCTTAGACCAATCCCCCATGTACTTTTTCCCCTTTCCTCAGATGCACCAGTGTTCATATAcctaagtttatttttaaatgtgcgtCACTGATCTACATTCAAATTCTTGCAACAAATTAGAAAATGGTCAATTAAAAGCTGATTGAACTATTatgcagtttaaatatttaatggtgAAACTGTTGGCTAGAGAagcatgtattttttcatgGTAAATTTGTTATGTGGGGTGGGGGTAGGGGTTATACTGGGAGTAATACTCCATCCATCACCAAGGATCCAACGTTGCTTCTTCCTGATTGACGATGTATGTCAACTAAACTTCTGTGAGGCAAATAGTGTGATTTAGATGTAGGtgtgatttctgtttttgtttttgttattttgttttttcttttgtgcctTCATAATGTTTGGcttattttaatgagaaatatatctatttatcaCCAAAGTTTAACTCGATGGCAgccttttcacatttaaaagcatgGTTTACGCTCAGACTGCTTATCACAGCCTCTGTGAAATGACTGCTTACAtgggtgtttttatttgtggaaTTATACAAAGGTGTTCAGGGACTTTTTATTGGTATTATTCacttttactttattgtacaaTTGGACTGTTCTATAGTGCACAAGCACAGAAAGTGTTGATACTACACATGCTCACCTTGCCTTAGTGGGTATGCAGGGGAGGTTAGATCAAGGACCACAAATCTTTACCTAAACCTAATTTCCAACTTTTAAATTTGACCAATTTTTGGCATTGTTAAGCAGATTTATTGACCTAGATTAAGGAATACCTTAGAATGTTcgtcaaaataatttaaatcgaCTTTTTTAATACAGGTTTGTTTTCCAGTTACTTTTAATGATCTTTAAGTCCAAGTAACTTGGACATCATATAAAGGATTTTAAAGCACAGTATTTGCAACATAcagctttatatttaaaatggtaatcATCATCAGGAAAGTAGTTTATAATCAtacactaaaaaatatatatttacttgcAGTGAATTTATGCAATTGCAACCCCCTATTATATATGTTCCATGCTAATGCTTAGGCAAAACACTAACATTAGTTGAATTTTAGCACCTCTGTAAACCTGTTCATAATgtctttcatttttacttttaattatgtaGTATATACTAAGGAAtatatgttttcaatgtatACTACATACAACTGgtttatgaaaatgtgtaatggCACGATTTTCTGCAGAAATTTTTTCCATTGTGGTCATTACCTgacagtttgtgttgtgtgtaattTCTATGTCCGGATACCAATGTTGGAAATGGCAAAACCTTTCTGGGTAATCTGGCTTTAAAAAGGTAATTCTACAACTCTGCATATGCAGTATTTCTCTGAAAATTGACTCCAATAAATACCAGTTTTTATTCTACTTGTTTTGTACTTATGTAAAAGTACAGTTGCTAAAGAACAAAGTTTTGGGGTATTTGGAAGATTGGCTTACACTGAGACTTACCATTGTTTATTGGTTCAATGATAATTGTGATTTATCTTTCTTCAATAAGGGTTATGCTGCTAAGCTAAAAGGATAGGAATTTATTTGTGACTCAGAATACACATTAGGTATTGGCTTTACACTTGCTTCATGTGACTAATTGTAAAAGTTCGAAGTACATTTTTGTGTAGTTACTATTTTGCTTAAAGCTGAATTTTGATTTGTGACCCAGATTTAAACCATTGTAGCCTATTAACTTTTGGGGAGAGAATCTATTAAATTACAAGTTTAAACATGTTGCACTGAAGAGCCTGCTCCTGCTTTTCactttgctttttaatgtcATCCAGCTCCTTTTACCCCCACGGATTTAATTGGACTACTTTCTACCTAGTTGATCTTTACATCAGCACATTTCCTAGCAAGCCAAGTGATTTTGAACTTTCATATAGAATGCACATGACACTGATTAACCTGGTACTTCTATAATGTTGAAGCACAATTGAGATTTCAATAGCTGTGGTTGCAGGGGACAATGACTTTCTGAACTTGACTGACAAATCTGACTAACcactcaacttttttttttttttcagcagactcaagtgaaaatgaaattcCTGTGATTTAGTAATTGATCAAGTAATTAGTATTGCTGTAGAGggtagaatacattttaaaaaaatattaagaggTATTCAGGTTGCTGTACCCCATCCAGATTTagtgtataattttaaaggTTTTTGGAGAGATGCACAATTCTTCATTTTGTGCCCTCAGGTTGCAGTTTACTATCAGAGTGGCaagagttttcattttctttttaaattgacatgATCAAACTGGAGTCCTGACAGCTATAATACAAATGTGGTTCATTTTAGACTGAACAAGGCATGAAACTCCAAAAGTATTGACACTTGGGCTATAATTTTGCTTCTGTCAATGAAAAATCTGCATATTGCttagtggtttttttttgtttgtttttttttttttttacctttacaTGATAAATGCACAAAAAGCAACCAGGTGTAATATAAAACcggtaaattaaaaatgtactttgttgTATGCAGTATATAAGAGGGCTATCgaattgtatttgtgttcaaTGACGTGCTGCATAAATCGGTATAATACCTCTTCTATAGGTCCACAATAAGATGTTTTAAgacattatgtaaaataagaTCATTAAGCAaggtaaattactttttttaagtttgacacACTCCATCTCTAATTTGGTAAGAAACTGCTAAACGTTAAAAGAACTTGATTTACTGTTTCAGTGTAAAACTCATGACATGTTCCAAGCAATAGATCACGTGTATACAAATCAGTATAGAGTTAGCCCCCCAAGATGCTTTCAATTTGAGAAACACTTCATGATGTTTGTTCACTGAAAGAACTGCAAGATGTCCATTGACTCTCATCCACTTGTGTTCTTCCCCACAAACATTGTAATGTTCAATTCACGATTACAGTCCCAGCTGCCCTTGGGaatttaacattacatttctatACTATCCAGGAGGTAGCTGGCTTATCTACCAGACTAGTGTATGCAACAATGTGTTTAGTAATGGAAGTTAGATTTCAAATTATggctttgctttctttctaaTGTTAAAATAGGAAACAATGGTTGTGTTCTTAACCAGTGTCATTCAGAATCTATTAAACTTTCTGATCCATATTCAGA

Function

GO: NA

KEGG:

id description
K18621 ANLN; actin-binding protein anillin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU109567 lncRNA upstream 36499 25885446 ~ 25885703 (+) True G87786
TU109559 lncRNA upstream 52007 25858949 ~ 25870195 (+) True AMCG00021693
TU109541 lncRNA upstream 89214 25832454 ~ 25832988 (+) True G87765
TU109518 lncRNA upstream 168949 25753053 ~ 25753253 (+) False AMCG00021692
TU109467 lncRNA upstream 392617 25529324 ~ 25529585 (+) True G87704
TU109615 lncRNA downstream 147790 26091176 ~ 26094196 (+) True G87824
TU109703 lncRNA downstream 622122 26565508 ~ 26569148 (+) False AMCG00021707
TU109760 lncRNA downstream 766831 26710217 ~ 26713476 (+) True G87939
TU109766 lncRNA downstream 777523 26720909 ~ 26737883 (+) True G87942
TU109790 lncRNA downstream 864871 26808257 ~ 26810867 (+) True G87961
AMCG00021693 mRNA upstream 54701 25843694 ~ 25867501 (+) False AMCG00021693
AMCG00021694 mRNA upstream 89818 25803425 ~ 25832384 (+) True AMCG00021694
AMCG00021692 mRNA upstream 169075 25752357 ~ 25753127 (+) True AMCG00021692
AMCG00021689 mRNA upstream 205616 25714584 ~ 25716586 (+) True AMCG00021689
AMCG00021687 mRNA upstream 244021 25632186 ~ 25678181 (+) True AMCG00021687
AMCG00021704 mRNA downstream 177465 26120851 ~ 26121836 (+) True AMCG00021704
AMCG00021702 mRNA downstream 187096 26130482 ~ 26148080 (+) True AMCG00021702
AMCG00021703 mRNA downstream 209074 26152460 ~ 26161715 (+) True AMCG00021703
AMCG00021706 mRNA downstream 392264 26335650 ~ 26371009 (+) True AMCG00021706
AMCG00021705 mRNA downstream 473920 26417306 ~ 26432305 (+) True AMCG00021705
TU109403 other upstream 556225 25276776 ~ 25365977 (+) False AMCG00021682
TU109135 other upstream 1744212 24174509 ~ 24177990 (+) True AMCG00021656
TU108421 other upstream 4686122 21235070 ~ 21236080 (+) True G86861
TU108414 other upstream 4690714 21229852 ~ 21231488 (+) True AMCG00021561
TU109668 other downstream 208682 26152068 ~ 26197076 (+) False AMCG00021703
TU110128 other downstream 2834929 28778315 ~ 28778733 (+) True G88238
TU110172 other downstream 3117501 29060887 ~ 29065339 (+) True G88276
TU110265 other downstream 3435189 29378575 ~ 29382273 (+) False AMCG00021779
TU110267 other downstream 3435189 29378575 ~ 29382273 (+) False AMCG00021779

Expression Profile