RNA id: XM_043256903.1


Basic Information

Item Value
RNA id XM_043256903.1
length 2372
RNA type mRNA
GC content 0.49
exon number 11
gene id creb3l4
representative True

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 26274171 ~ 26280161 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CATTAACGAGTTTATGTCGCACTGAACCCGTGTTTTGTTCTTCTTTGAAAGCTCAGATGAACAGCGTGACCCGTGTCTTTCTGCTGAGTTTTCTTCCAGTATCTGCTCCACTTCTTTTCCTGTTTTCGGGAAACTGACGACGTGCGTGACGCGCTATTGGTCAGCGTCTCTCCGGAGCCCCGCCCACGCGCTCAACGCGGAAGAGGATTACTCCGAATCAAATGAACCAGGAGATCCGGATCCACACGGAGAAATATCCGTGTTTCCTCGCAGAATAAACCGAACGAAGGATGCGAGAAGCAGATATCGTGTCCGGGGTGGTGAAATCCACCGAGCGTGATGCTGAGGAGGTTCTGGAGAGCGGGCTGCTCCTGGAGGAGTCTGGGCTGTTGCACGCTGGACTGAAGCGGCACGCGGAGGAGTGGAGCGTCGAGCAGCGCTGTAGTTTGAACGACAGCGAATCTGAGGAGGTTCTGAACGCTATAAACCCAAACGAGATGTACACGTCGACGGTGTGTGAGAGCGACAGCGGTCTGTCTGAAGATCAGTCCTCAGACGGAGCCCACGAGCAGAGCCTCGCTAACACCGTCTATCAGGTGGTGTATGACATCAGCGGTGTGGGAGGAGCCTCGGAGCAGGAGACGCCTCAGATGGACGTGATCTCCATCGAGCTGGatgagtGGAGCTCTCAGATGCTGCTGACCGACTCGTGTGTGGTCAACGAGCTGATGTCTTCCGTCAAAATGGAGAACGTTTCTGCTCACGATGTGCAAGACATTCAGAACCCAGATGGTTTTTTGGTTTATCCTGAACTCCAGCTCACAGAAGAAGAGCAGAAGCTGCTGGACCAGGAGGGAGTCTCACTGCCCAACAACCTGCCCCTGACcaagGCTGAGGAGAGAATCCTGAAGAAAGTGAGACGGAAGATCCGTAATAAACTCTCGGCGCAGGACAGTCGCAGGAGGAAGAAGGAATACATCGATGGTCTGGAGAGCAGggtggCGGCGTGTTCAGCTCAGAATAAAGAGCTGCAGAGGACCGTGGATCAGCTGGAGAAACACAACGTgtctCTCGTGGCTCAGCTGCACAGACTGCAGGCTCTGATCAAGCAGACGGCCACTAAAGCTGCGCAGACGAGCACCTGTATCATGATCCTCATCTTCTCTCTGGCTCTACTCATCTTCCCCAGCTACAGTCCGTTCAGCCGCCGCTCTCCGTCGGAGGAGGACAGCTACGCTCCGGCCAGCGTGATTTCCAGAAACATCTTGAACGACGTGGAGTCTCTTCCGCTCCTGGAGGATCCTGGAGAAGACGAGCCGGTGTCTTCAGAGCCTCTGTCTCTCCCGCCGGGACCCAGACGCGCAGACGCAGACGCAGACGAGCCGCGGCAGACGCAGGACGCAGCTCTGGAGCAGGACCGGACACCGGAGCAGAGGAACGGCTCGGACGCAGCTCTGTCTGTGAGTTTATCAGCTCCGGCGGCTGCAGCTAACGCAGACGCAGCCAAACCACCGCATGCTGACGAGATGTGAGGCTGCGCATCAAAGCCCAGAGGAGAGCTTCTCTCACATGCCTTTATTTATTCCCCCTGAACACAGAAACTTCATCAGGTGCTTGAGTTCAGTGAGTCAGCGCTAAAAGAATCATATCAGTGTGGTTTGTGTTTCACAGCACTCTTAAACGTttaattcatttgttaacatatAGATTTATTAcgtgcatataaatacacacacactcagtattTCGGTAAAATATGTCATGGTTGTTGTATATTAAATgcgtttatttataatataaattatattcatataaatatagccctaaatatttaagatatacactgtatgtgtgtgtattcatagaTGCGTCATAAATGTGcacagaaacttttattttgtaattgctTCCGATGACAGCGCTAGTGCTACAGAGCGGTTTAGtgcggttttttttttgctttagtaaACAGAAAAGGCGAGActagatcacgtgacactaaagactggagtaatgattcgATCTCAGAAATAGCAggttcacacagaaaacacctTCACtgttctttctgtatttttgcagCCTCTGTGAGAAGAAATATAAACCTCACTGAAGTCAAACACTAGTGTATATCTGAATGAGTTTGTATTGAAGCAGACATACCTGAGAGCCTTTCTACAAAATCCCCAAGCTTCCtcgcttttgtttttataatagaaAAGACCGAACTGTAGAATAATACTGTGTGGAGTTGATCAGAGTTGAATACAAGGCTTGTGggatgttttaatgtttcagatcgtCTGAGGGTGAACGGGTTGGGtctcttttcttattttattgtcttctgaataaaaaagacctttataata

Function

GO: NA

KEGG:

id description
K09048 CREB3; cyclic AMP-responsive element-binding protein 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151384 lncRNA upstream 4511 26266474 ~ 26269660 (+) True G102403
TU151381 lncRNA upstream 4593 26266474 ~ 26269578 (+) False G102403
TU151351 lncRNA upstream 37452 26234882 ~ 26236719 (+) True G102393
TU151282 lncRNA upstream 148111 26093845 ~ 26126060 (+) True G102348
TU151286 lncRNA upstream 172328 26099662 ~ 26101843 (+) True G102352
TU151415 lncRNA downstream 107785 26387946 ~ 26388699 (+) True G102423
TU151423 lncRNA downstream 125783 26405944 ~ 26407182 (+) False LOC122357543
TU151421 lncRNA downstream 143810 26423971 ~ 26429629 (+) False LOC122357543
TU151388 lncRNA downstream 157248 26437409 ~ 26441594 (+) True G102405
TU151434 lncRNA downstream 165156 26445317 ~ 26446288 (+) True G102439
XM_043256902.1 mRNA upstream 58586 26211699 ~ 26215585 (+) True LOC122357495
XM_043256901.1 mRNA upstream 64693 26202853 ~ 26209478 (+) True LOC122357494
XM_043257689.1 mRNA upstream 98437 26168657 ~ 26175734 (+) True gnrhr3
XM_043256942.1 mRNA upstream 107588 26155639 ~ 26166583 (+) True LOC122357542
XM_043257681.1 mRNA upstream 152419 26116217 ~ 26121752 (+) False eomesb
XM_043257590.1 mRNA downstream 1347 26281508 ~ 26293384 (+) True clk2b
XM_043257589.1 mRNA downstream 21161 26301322 ~ 26311074 (+) True LOC122357920
XM_043258046.1 mRNA downstream 31666 26311827 ~ 26325763 (+) False pklr
XM_043258045.1 mRNA downstream 32720 26312881 ~ 26325763 (+) True pklr
XM_043258044.1 mRNA downstream 33958 26314119 ~ 26325763 (+) False pklr
TU151318 other upstream 102769 26168558 ~ 26171402 (+) False gnrhr3
TU151254 other upstream 238533 26032979 ~ 26035638 (+) True G102332
unassigned_transcript_1961 other upstream 2045923 24228177 ~ 24228248 (+) True trnae-uuc_32
TU150835 other upstream 2057408 24216243 ~ 24216763 (+) True G102017
TU150815 other upstream 2184649 24086724 ~ 24089522 (+) True tmem35
XR_006252567.1 other downstream 94172 26374333 ~ 26383634 (+) False khdc4

Expression Profile