RNA id: XM_043258032.1


Basic Information

Item Value
RNA id XM_043258032.1
length 4297
RNA type mRNA
GC content 0.52
exon number 24
gene id drp2
representative False

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 24101551 ~ 24210597 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tagcGTGCATAAATTATCAATTTTAATAGATTAGTTTGCTCCAAGAcctcatagtatttttttttttttttttttaatgtgaaggATCAACATTCTGCCTATCAAGATCAGATCAATCCCTATAAagactgtttctttaaaaatcaataaagacCATTGTTTTTCCACAGAAGCACTGTAAGCGTCCCCTAGGTAACTTGGTCCAAGTGCATCCTAGGAAATCTCAGCGTCGAGGCAGCTTGAGCAAAGCTCTACGGCTTTACGTTTTACAGCCCGTCTCATAAATGTGAGCGCCTTCAACTCTGCGTGACACGTCTTTGTATTTATGAAGGGCTCTGGAGATGCCTCGCGACGACGCGTCCCCTCTCCGGTCCGAGCTATTTTCAGCGCGAGCGCGTCACGATGCCGTCCAGCAAACTTCATTTGGAGTGAATGAAGAACACGCGCGCACCTCCGGGATTACAGCCCGTGCGTTATCGTGATTTGAGGCAGGTGCACAACTTCAAACGACGAATTCTGCGAGCGCGAAACTACGCGATCCTCCTCGCTCGGCTTGATGTCCTCGTTCATGTATGAGAGATTATTCGTGCGTCGTCGTCTGCCCGATCATCACTTCTCCACTCACCTCGCAGCTTTCCTCTTTTCATCTTAGCGTCCGTGCAAAATGGAATTCTGAAGTGCTCCACTTTCGCAGTTTCTCACCTTTCAAAGAAAAAAGAGTGGACTTCAGTGGGAGCCAGCAGGTTGAAGGTCCAGcttcaaagaaaaaaCTGCAGGGCGGCCCTCGTGGCCGGGATGCCACTGTGTACCCTGCCAGTCGGCGGTGGATCCTGAGGGGCAGGAGCTGCCCACCCAGTGCAGGGGGCAGAGGAACAAGCACCCTGAGCACGACATGAATCTCTGCTGGAACGAGATCAAACGCAAATCCCACAACATCAGGGTGCGGCTGGAGGCCTTTTCGGACAACAGCGGGAAGCTCCAGCTGTCCCTGCAGGAGATCATCGAATGGCTGACAGCTAAAGATGAGGAGCTGTCCGAGCAGCTGCCCATAGGTGGTGATGTGGGAGCGGTGCAGCACCAGCGGGAGTTCCACCAGGCTTTCATGGAAGATGTCAAATCCAGAGGGCCCTACATCTACTCTGTGTTGGAATCAGCTCAGACCTTCCTGGCACAACACCCATTCCAGGAGCCGGAGGAGACATTGCCTGATGGCAAAGAAGTCTCTCCTCGCCGGCGAATGCTGAATGTAAGTCGCTCCGTGTGGAAGCAGGCCAACGTGGCCAGTGACCTGTGGGAGAAGTTGACGGCACGCTGCGTGGACCGACACCGGCACATGGAGCGAACCCTGGAGAGGCTGCTACAGATCCAGGCTGCCATGGAGGAGCTGGCTGTGGCTCTGGAGCAGGCGGAGGGAGTGAGGGACGCCTGGGAGCCTGTGGGAGACCTGTTTATTGATTCGCTGCAGGACCATATAGACGCTACCAAGCTATTTAAAGAAGAGCTGACCCAGGTGAAGGAAGGAATGAAACACATAAATGACCTGGCCCACCAGCTGGCCATATCTGATGTGCACTTGTCCATGGAGAACGCCAGGGCTCTGGAGCACCTCAACAACAGATGGAAACTTCTGCAGGGGTCTATTGAAGAACGTCTGAAACAGTTGCAGGATGCCCACAGAGATTTTGGCCCCGGATCACAGCACTTTCTTTCCAGCTCCGTGCAGATTCCTTGGGAACGTGCCATATCCCCCAACAAAGTGCCATACTACATCAACCATCAGGCTCAGACAACCTGCTGGGACCATCCAAAGATGACTGAATTATACCAAGCTCTGGCGGACCTGAACAATATCAAGTTCTCTGCATACCGGACGGCCATGAAGCTGAGGCATGTGCAGAAGGCTTTAAGATtGGACTTGCTGAAGTTAAGCAGCGTGGTGGACGTGTTTCGAGAACAGGAGCTGCAGCATGCCGAGCACATTATGGATGTGGTTGAGGTCATCCACGCTCTCACTTCCTTGTATGAGAAACTAGAGGAGGAGAGGTCCGTCCTGATCAATATCCCCCTGTGCGTCGACATGTGTCTCAACTGGCTGCTGAATGTTTACGACAGTGGTCGTAATGGTAAGATGCGAGTGCTCTCCTTCAAGACGGGCCTGGTTATTCTATGCAACGCAGACATCCAGGAaaagtataaatACCTTTTCAGACAGGTGTGTGGTCCAGGTGGTCTGACAGATCAGAAACATCTCAGCCTGTTACTACACGAGGCTATTCAGATCCCTCGGCAGCTTGGGGAGGTGGCGGCGTTTGGAGGGAGCAACGTGGAGCCCAGTGTCCGCAGCTGCTTTCGAATGGCTCCAGGTAAGTCAGCAATAGAAGTTTCTCACTTTCTGGAGTGGATGAGCCTAGAGCCTCAGTCTGTGGTGTGGCTTCCTGTTCTGCACCGGGTAACTGTGGCCGAGACCGCCAAGCACCAGGCACGCTGCTACATCTGTAAGCAGTGCCCTATCAAGGGCTTCAGGTACCGAAGTCTGAAACAGTTCAATGTGGACATCTGCCAGACGTGTTTTCTGACGGGCCGGACCACCAAGGGCAAGAAACTACACTACCCCATCATGGAGTACTACACCCCGACGACCTCAGGCGAGAAGATGCGGGACTTCGCGAAGACGCTAAAGAACAAGTTCCGCTCGAAGCAGTATTTTAGTAAACACCCTCAAAGGGGATACCTGCCCGTTCAATCAGTACTGGAGGTGGAGAGCTCTGAGACGCCCTGCTCATCTCCCAGGCTGCCTCATGCGGACACACACAGCCGGATCGAGCATTTCGCCAGCAGGTTGGCAGAAATGGAGAACCAGAGCTGTTCCTTTTTCACAGACAGTCTCTCTCCGGATGAAAGTTTGGATGAAGATCAGTACCTCCTACGTCACTCCAGCCCCGCCCTCGAGCAGGACTCCCCCCACGGCCACCTGCTGGCCCACCTGGACTGCCAGGACAGAGAAGAGCTGCAGCGCACCCTCCAACGCCTGGAGAACGAGAACAGGGTGCTGCAGGGCGAGTATCGGCGGCTGAAGTGGAAGCATGAAGAGGCAGCAGCTTCACCCCAGCTGCTGGAGTCGGGTCCCGGGTCACCGGCTGGTCAGCAAGATGAGGAGCTCCTGGCCGAGGCTCGAGTCCTTCGACAGCATAAGACCCGACTGGAGACACGGATGCAGATTCTAGAGGACCACAACAAGCAACTGGAGTCCCAGCTACGCAGACTCAGAGAACTACTGCTGCAGCCCAAAGATGATTCGGAGGCCAATGGCTCGGCTCCTTCTTCTCTATCCTCTCCTGTGTCAGGGGGTGGCCACCAGGGGGAGCCTCCCAGCAGAGAGACCACAGACACAGAAGCTGCAGGTGAGGATTTGGATCATGAGCAGGACACCGTACTGCAGCTGCAGCAGGTAATCGAACAGCTGAGGAACGTCTTCCCATCTGAGCCAGGTCCATGAGGAGCCTGAAGCCAAACTCAGAGGCCTCTAATTGTGCAGgCGTCGTATTGCTCATCTTGTTGTGGGCGGGGTCTTGAGAATGCAGGGCTGGCGAATTCATGGACAGACGAGGCGGCTGCGAGAAGAGTTTCAAGACAACCTTCTCAGCCTGTGCTTCTTTGCCGATCCCAAAGAGCTGTGGGATATCTGAGTGCTAACTAAACAAACTAATGTTTACATGGTGCCAAAGGCCTGCACTGATCCGGACACTGTGCTAACCCGTGTAGTAATGCAAAGTGTGTGGCTTCATCAGTACAGCACAAGAACCACAAACAGGACTTAAAACCACACAGAAGAGGGGAAACTTCTTAAGTCCCTGTGCCAgcaacttctgtgtgtgtgtgtgtgtgtgtgggtgtgtgtgtgtgtgtgtgtgtgtgtgttttttctttttgaaaatggTTTACTATGTTCTGTGACTCACTCAtgcacataaatacaaatatacacatatactgATGATAAGTCACGCTTGGCAGTGTGTGGCCCTTGTTCTGTGAAGCAGAAAAGAACAGATTTCCCTGAACTGTCAGGACACACGGCAAGCTTATTTACACTGTAAGGACGACACGTCTTCTGTTGAGGCTATCATTTATTTAAGATGCCAAAGTGCCCAGGAGCATTATGCACTTGCCCCGACATTCTGCTTATCtttcaaattataaatacacatatacacagacacacactgcaaaaatcattttcttgatcagtattttttttttgtaaacaaaaatatctaaacatattttaaacaaaata

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU150701 lncRNA upstream 129836 23970291 ~ 23971735 (+) False nitr14b
XR_006252587.1 lncRNA upstream 151006 23949157 ~ 23950565 (+) True LOC122358238
TU150641 lncRNA upstream 744033 23357074 ~ 23357538 (+) False LOC122357577
TU150639 lncRNA upstream 744575 23356526 ~ 23356996 (+) False LOC122357577
TU150627 lncRNA upstream 798032 23295876 ~ 23303539 (+) False LOC122357577
TU150837 lncRNA downstream 59454 24270051 ~ 24270368 (+) True G102019
TU150900 lncRNA downstream 366591 24577188 ~ 24577506 (+) True G102068
TU150901 lncRNA downstream 367606 24578203 ~ 24578529 (+) True G102069
TU150994 lncRNA downstream 847234 25057831 ~ 25059187 (+) False LOC122358267
TU151009 lncRNA downstream 879915 25090512 ~ 25145183 (+) False G102143
XM_043258034.1 mRNA upstream 223 24090266 ~ 24101348 (+) True cenpi
XM_043256695.1 mRNA upstream 12089 24086790 ~ 24089482 (+) False tmem35
XM_043257604.1 mRNA upstream 15165 24075475 ~ 24086406 (+) False arl13a
XM_043256882.1 mRNA downstream 18984 24229581 ~ 24266609 (+) True elf1
XM_043256884.1 mRNA downstream 27619 24238216 ~ 24266609 (+) False elf1
XM_043256881.1 mRNA downstream 27620 24238217 ~ 24266609 (+) False elf1
XM_043256883.1 mRNA downstream 36821 24247418 ~ 24266609 (+) False elf1
XM_043257433.1 mRNA downstream 181723 24392320 ~ 24444524 (+) False pcdh19
TU150815 other upstream 12049 24086724 ~ 24089522 (+) True tmem35
unassigned_transcript_1960 other upstream 49796 24051703 ~ 24051775 (+) True trnav-uac_6
XR_006252531.1 other upstream 1792459 22282292 ~ 22309112 (+) False gria2b
XR_006252530.1 other upstream 1794120 22282292 ~ 22307451 (+) False gria2b
TU150017 other upstream 2700818 21400327 ~ 21400753 (+) True G101440
TU150835 other downstream 5646 24216243 ~ 24216763 (+) True G102017
unassigned_transcript_1961 other downstream 17580 24228177 ~ 24228248 (+) True trnae-uuc_32
TU151254 other downstream 1822382 26032979 ~ 26035638 (+) True G102332
TU151318 other downstream 1957961 26168558 ~ 26171402 (+) False gnrhr3
XR_006252567.1 other downstream 2163736 26374333 ~ 26383634 (+) False khdc4

Expression Profile