Fish Single-cell RNA Database

CELL TYPE: Cycling progenitors

Distribution of Cycling progenitors in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000045836	mapk11	4: 5506946 ~ 5522437 (+)
ENSDARG00000006409	mapk12b	4: 5523690 ~ 5530441 (+)
ENSDARG00000007315	tmpoa	4: 16857722 ~ 16876336 (-)
ENSDARG00000101813	nap1l1	4: 2354892 ~ 2380173 (-)
ENSDARG00000008022	kif18a	7: 31976764 ~ 32021853 (-)
ENSDARG00000004713	mad2l1	7: 57629370 ~ 57637779 (-)
ENSDARG00000016363	her8a	7: 26429941 ~ 26436480 (-)
ENSDARG00000036180	ccnb2	7: 30626378 ~ 30631119 (+)
ENSDARG00000005993	prc1b	7: 50353297 ~ 50367642 (-)
ENSDARG00000036036	mdka	7: 39166460 ~ 39178198 (+)
ENSDARG00000103316	si:ch211-212k18.5	7: 19552381 ~ 19558842 (+)
ENSDARG00000034855	ccnb3	7: 22981441 ~ 23006732 (+)
ENSDARG00000006487	anp32a	7: 33345624 ~ 33351532 (-)
ENSDARG00000058369	mex3b	7: 12061787 ~ 12065668 (-)
ENSDARG00000051923	ccnb1	5: 54711027 ~ 54714789 (-)
ENSDARG00000010770	sox19a	5: 24199180 ~ 24201437 (-)
ENSDARG00000100573	ckap2l	5: 13549603 ~ 13561074 (+)
ENSDARG00000067984	gas1b	5: 32360336 ~ 32363372 (-)
ENSDARG00000012432	fam76b	5: 23585215 ~ 23596339 (-)
ENSDARG00000052695	nr2f1a	5: 49744713 ~ 49751549 (+)
ENSDARG00000068759	si:ch211-244o22.2	5: 14477282 ~ 14521500 (-)
ENSDARG00000044437	cdca5	5: 67175283 ~ 67180800 (-)
ENSDARG00000025301	gfap	3: 31792441 ~ 31804481 (-)
ENSDARG00000038066	kpna2	3: 25369965 ~ 25377163 (-)
ENSDARG00000019507	mcm5	3: 25999477 ~ 26011440 (+)
ENSDARG00000093622	spc24	3: 19355869 ~ 19363981 (+)
ENSDARG00000054578	arl6ip1	3: 31104891 ~ 31115996 (-)
ENSDARG00000052617	raver1	3: 46559639 ~ 46587006 (+)
ENSDARG00000030756	dnmt1	3: 54591218 ~ 54607166 (-)
ENSDARG00000101037	asf1ba	3: 49504919 ~ 49514874 (-)
ENSDARG00000105112	ntn1a	6: 19804048 ~ 19926657 (-)
ENSDARG00000057683	mcm6	6: 12968101 ~ 12985390 (+)
ENSDARG00000006260	tuba8l4	6: 6972953 ~ 6976107 (-)
ENSDARG00000039208	nasp	6: 33911154 ~ 33916788 (-)
ENSDARG00000031664	sox21a	6: 7414215 ~ 7415343 (+)
ENSDARG00000060115	lrrn1	6: 43076516 ~ 43092175 (-)
ENSDARG00000012485	aurka	6: 60125033 ~ 60139655 (+)
ENSDARG00000100446	si:ch211-286o17.1	6: 47424266 ~ 47462413 (+)
ENSDARG00000095896	pou3f3b	6: 14949950 ~ 14953352 (+)
ENSDARG00000114670	ube2c	6: 55287823 ~ 55297274 (-)
ENSDARG00000020289	pif1	2: 17096161 ~ 17115256 (-)
ENSDARG00000010192	pax3a	2: 47370323 ~ 47431205 (-)
ENSDARG00000060041	lig1	2: 44301276 ~ 44344321 (-)
ENSDARG00000076228	kif2c	2: 33926606 ~ 33952021 (+)
ENSDARG00000100741	cdc20	2: 19217586 ~ 19234469 (-)
ENSDARG00000103672	cirbpa	2: 58841181 ~ 58848884 (+)
ENSDARG00000063385	cenpe	1: 260039 ~ 296057 (+)
ENSDARG00000017744	smc2	1: 19535120 ~ 19561801 (+)
ENSDARG00000023330	anp32b	1: 26660369 ~ 26664840 (-)
ENSDARG00000030759	melk	1: 21861387 ~ 21881818 (-)
ENSDARG00000029722	hmgb2a	1: 38169512 ~ 38171787 (-)
ENSDARG00000058471	plk1	1: 9153141 ~ 9161843 (+)
ENSDARG00000042032	pou3f3a	9: 6658594 ~ 6661666 (-)
ENSDARG00000077620	cdca7a	9: 2879763 ~ 2892250 (-)
ENSDARG00000092651	si:dkey-57a22.11	9: 21977383 ~ 21983659 (+)
ENSDARG00000098802	map7d1a	16: 35661331 ~ 35776074 (+)
ENSDARG00000009823	pou3f1	16: 33593116 ~ 33595985 (+)
ENSDARG00000031775	ube2s	16: 13672768 ~ 13680692 (-)
ENSDARG00000070656	si:ch211-69g19.2	16: 12052010 ~ 12060782 (-)
ENSDARG00000099572	hmgn2	16: 51180938 ~ 51184126 (+)
ENSDARG00000098529	ccne2	16: 40575742 ~ 40586793 (+)
ENSDARG00000037188	rpa2	16: 4746588 ~ 4770233 (-)
ENSDARG00000069981	cspg5a	16: 42319438 ~ 42390640 (-)
ENSDARG00000041361	ttk	16: 5110455 ~ 5143176 (-)
ENSDARG00000101831	irx1a	16: 813780 ~ 817937 (+)
ENSDARG00000024204	mcm3	20: 34770197 ~ 34783743 (+)
ENSDARG00000014013	lbr	20: 36393912 ~ 36416922 (-)
ENSDARG00000014685	esco2	20: 39344889 ~ 39359154 (+)
ENSDARG00000068213	fzd10	8: 44295983 ~ 44298964 (-)
ENSDARG00000057322	tmem47	8: 18565904 ~ 18582922 (-)
ENSDARG00000010710	msi1	8: 39607466 ~ 39647216 (+)
ENSDARG00000031495	seta	8: 2585256 ~ 2591654 (-)
ENSDARG00000043716	cldn5a	8: 4697764 ~ 4699320 (+)
ENSDARG00000098591	tubb2b	8: 52713232 ~ 52715911 (-)
ENSDARG00000042708	tuba8l	8: 28345352 ~ 28349859 (-)
ENSDARG00000100019	arhgap11a	17: 92784 ~ 114121 (-)
ENSDARG00000008803	marcksb	17: 15534815 ~ 15539701 (+)
ENSDARG00000055133	cenpf	17: 32720413 ~ 32743249 (-)
ENSDARG00000087554	cdk1	17: 20923691 ~ 20929461 (+)
ENSDARG00000010948	kif11	17: 19481049 ~ 19497006 (+)
ENSDARG00000001313	g2e3	17: 28798725 ~ 28811747 (-)
ENSDARG00000053558	rtkn2a	17: 43610894 ~ 43623370 (-)
ENSDARG00000100558	slbp	14: 14841685 ~ 14846166 (+)
ENSDARG00000101180	mcm7	14: 94603 ~ 102022 (+)
ENSDARG00000103996	spdl1	14: 38810385 ~ 38843690 (-)
ENSDARG00000105479	si:ch211-126c2.4	14: 30898255 ~ 30918662 (-)
ENSDARG00000002344	tubb4b	14: 5861435 ~ 5865146 (+)
ENSDARG00000103732	plp1a	14: 14577246 ~ 14596699 (+)
ENSDARG00000053569	sox3	14: 32742701 ~ 32744464 (-)
ENSDARG00000021794	hmmr	14: 28545198 ~ 28562971 (+)
ENSDARG00000057026	ran	14: 21685537 ~ 21693914 (+)
ENSDARG00000007960	hnrnpaba	14: 6962271 ~ 6968589 (+)
ENSDARG00000037640	aurkb	14: 240487 ~ 246342 (-)
ENSDARG00000011094	ccna2	14: 46354648 ~ 46374870 (-)
ENSDARG00000052856	khdrbs1a	13: 45009957 ~ 45022527 (-)
ENSDARG00000005454	tacc3	13: 35880573 ~ 35892305 (-)
ENSDARG00000057738	hells	13: 8255106 ~ 8270718 (+)
ENSDARG00000002403	nusap1	13: 33251721 ~ 33256667 (-)
ENSDARG00000104943	mad2l1bp	13: 33695678 ~ 33700461 (-)
ENSDARG00000004782	fgfr3	13: 13213567 ~ 13294872 (-)
ENSDARG00000102832	baz1b	18: 41560822 ~ 41591684 (+)
ENSDARG00000040926	nr2f2	18: 23868650 ~ 24023013 (-)
ENSDARG00000002304	gins2	18: 30481030 ~ 30499489 (-)
ENSDARG00000073944	si:ch73-386h18.1	18: 6039141 ~ 6083792 (+)
ENSDARG00000014943	kif23	18: 20435821 ~ 20458840 (-)
ENSDARG00000105687	CABZ01070258.1	18: 49282063 ~ 49359785 (+)
ENSDARG00000075621	birc5a	12: 34429702 ~ 34435604 (-)
ENSDARG00000102624	kif22	12: 5048044 ~ 5071836 (+)
ENSDARG00000024488	top2a	12: 10706772 ~ 10740236 (+)
ENSDARG00000031293	dnajc9	12: 9497646 ~ 9510403 (+)
ENSDARG00000045167	dlgap5	12: 17633354 ~ 17655683 (-)
ENSDARG00000071694	ndc80	12: 10353333 ~ 10365969 (-)
ENSDARG00000091150	mki67	12: 10366617 ~ 10381282 (-)
ENSDARG00000070959	si:ch211-288g17.3	19: 9455218 ~ 9460322 (+)
ENSDARG00000023290	fabp3	19: 42955280 ~ 42993306 (+)
ENSDARG00000060917	anln	19: 35433155 ~ 35450857 (-)
ENSDARG00000001558	kifc1	19: 6990970 ~ 7000603 (+)
ENSDARG00000076659	cdca7b	19: 2569150 ~ 2582858 (-)
ENSDARG00000056594	irx1b	19: 28127654 ~ 28130658 (-)
ENSDARG00000004169	stmn1a	19: 17205143 ~ 17210928 (-)
ENSDARG00000007971	cks1b	19: 7835025 ~ 7838232 (+)
ENSDARG00000002613	rpa3	19: 25465025 ~ 25467185 (+)
ENSDARG00000035715	marcksl1b	19: 29798064 ~ 29800812 (+)
ENSDARG00000035957	gmnn	19: 31541607 ~ 31592425 (+)
ENSDARG00000003860	cbx3a	19: 18131512 ~ 18136410 (-)
ENSDARG00000043137	cdca8	19: 47771659 ~ 47782916 (-)
ENSDARG00000030479	hmgb1b	15: 31513065 ~ 31516583 (-)
ENSDARG00000100825	calm3a	15: 9234052 ~ 9272328 (-)
ENSDARG00000017673	nova2	15: 28685625 ~ 28766824 (+)
ENSDARG00000078748	si:ch211-137a8.4	15: 29085955 ~ 29091807 (+)
ENSDARG00000003938	rpa1	15: 26498339 ~ 26538989 (-)
ENSDARG00000102483	numa1	15: 44021044 ~ 44052927 (-)
ENSDARG00000032963	her12	23: 21444922 ~ 21446985 (-)
ENSDARG00000056732	her4.1	23: 21452557 ~ 21453614 (-)
ENSDARG00000056729	her4.2	23: 21469203 ~ 21471022 (-)
ENSDARG00000078654	tpx2	23: 32028574 ~ 32039790 (+)
ENSDARG00000094977	si:ch211-156j22.4	23: 27575539 ~ 27589829 (-)
ENSDARG00000028335	hmga1a	23: 3751451 ~ 3759692 (-)
ENSDARG00000055216	tuba1c	23: 35690657 ~ 35694461 (-)
ENSDARG00000001889	tuba1a	23: 35708730 ~ 35711398 (+)
ENSDARG00000020887	armc1l	23: 31912882 ~ 31919155 (+)
ENSDARG00000053990	hmgb2b	23: 45025909 ~ 45029559 (+)
ENSDARG00000054929	zgc:110540	21: 26485849 ~ 26490186 (-)
ENSDARG00000007184	zbtb16a	21: 23159385 ~ 23331619 (-)
ENSDARG00000014017	rrm1	21: 30772043 ~ 30787414 (-)
ENSDARG00000014274	rfc2	21: 25206289 ~ 25213616 (-)
ENSDARG00000009942	cdc6	11: 11781973 ~ 11792766 (-)
ENSDARG00000013016	pole4	11: 6197276 ~ 6206625 (-)
ENSDARG00000034624	nuf2	11: 429776 ~ 438518 (-)
ENSDARG00000054560	her15.2	11: 41994287 ~ 41996957 (-)
ENSDARG00000038205	her2	11: 41966117 ~ 41966854 (-)
ENSDARG00000054562	her15.1	11: 41981959 ~ 41984487 (+)
ENSDARG00000087393	prr11	10: 35250205 ~ 35257561 (-)
ENSDARG00000054155	pcna	10: 40821804 ~ 40826657 (-)
ENSDARG00000011404	fen1	24: 11908480 ~ 11921184 (+)
ENSDARG00000040041	mcm4	24: 35536664 ~ 35561672 (-)
ENSDARG00000062152	chaf1a	22: 22276283 ~ 22301929 (-)
ENSDARG00000101362	mibp	22: 5118361 ~ 5122557 (+)
ENSDARG00000103754	aspm	22: 23546926 ~ 23582605 (+)
ENSDARG00000013351	cirbpb	22: 18542010 ~ 18546649 (-)
ENSDARG00000071410	cks2	22: 21313332 ~ 21314860 (-)
ENSDARG00000102798	mcm2	22: 5632029 ~ 5655680 (-)
ENSDARG00000039880	arpp19b	25: 7653902 ~ 7663608 (-)
ENSDARG00000013719	gtse1	25: 19594160 ~ 19608460 (-)
ENSDARG00000020708	mdkb	25: 7872135 ~ 7880878 (+)
ENSDARG00000089042	foxb1a	25: 34154171 ~ 34156152 (-)
ENSDARG00000100918	prc1a	25: 7435291 ~ 7461466 (+)
ENSDARG00000102748	CABZ01074745.1	KN149951.1: 442 ~ 4132 (+)
--	kiaa0101	--
--	rrm2.1	--
--	acrc	--
--	cdc14b.1	--
--	h3f3a	--
--	her4.2.1	--
--	hnrnpa0l.1	--
--	id1.1	--
--	incenp	--
--	setd8b	--
--	sgol1	--
--	si:ch211-193l2.3	--
--	si:ch211-193l2.4	--
--	si:ch211-193l2.5	--
--	si:ch211-193l2.7	--
--	si:ch211-193l2.8	--
--	si:ch211-208h1.1	--
--	si: dkey-225f5.4	--
--	whsc1	--
--	zgc:165461	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Cycling progenitors.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE158142 (18hpf)	Danio rerio	head	1	Cycling progenitors	baseline	18hpf, 18 somites, untreatment	ENSDARG00000040041 (mcm4)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (18hpf)	Danio rerio	head	1	Cycling progenitors	baseline	18hpf, 18 somites, untreatment	ENSDARG00000102798 (mcm2)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (18hpf)	Danio rerio	head	2	Cycling progenitors	baseline	18hpf, 18 somites, untreatment	ENSDARG00000002403 (nusap1)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (18hpf)	Danio rerio	head	2	Cycling progenitors	baseline	18hpf, 18 somites, untreatment	ENSDARG00000024488 (top2a)	marker	DOI:10.1016/j.neuron.2020.09.023

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Cycling progenitors

Distribution of Cycling progenitors in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences