Fish Single-cell RNA Database

CELL TYPE: EVL, Periderm

Distribution of EVL, Periderm in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000016691	cd9b	4: 4234994 ~ 4261673 (-)
ENSDARG00000016526	gata3	4: 25054510 ~ 25064510 (-)
ENSDARG00000008867	rap1b	4: 18852821 ~ 18939338 (-)
ENSDARG00000099766	myl12.1	7: 71764665 ~ 71772711 (+)
ENSDARG00000033466	tagln2	5: 37087583 ~ 37095460 (+)
ENSDARG00000088590	pxna	5: 6670945 ~ 6718120 (+)
ENSDARG00000017320	f11r.1	5: 29831195 ~ 29848772 (+)
ENSDARG00000054616	cldni	3: 30921246 ~ 30927002 (+)
ENSDARG00000037870	actb2	3: 40526107 ~ 40529804 (-)
ENSDARG00000008383	arpc1a	3: 40796110 ~ 40804455 (+)
ENSDARG00000090369	zgc:86896	3: 36275633 ~ 36286650 (+)
ENSDARG00000017624	krt4	6: 39308498 ~ 39313027 (-)
ENSDARG00000054749	lmo4b	6: 25933736 ~ 25952870 (-)
ENSDARG00000063295	myh9a	6: 7735806 ~ 7776612 (-)
ENSDARG00000044356	tp63	6: 28795780 ~ 28914225 (+)
ENSDARG00000054063	arpc4	6: 40743367 ~ 40778294 (-)
ENSDARG00000102415	scinla	6: 24090950 ~ 24103666 (-)
ENSDARG00000008494	myl6	6: 39874177 ~ 39893526 (-)
ENSDARG00000034240	capza1a	6: 48322250 ~ 48347724 (-)
ENSDARG00000008030	myl9b	6: 1787160 ~ 1799561 (+)
ENSDARG00000035858	cnn2	2: 24548249 ~ 24554432 (-)
ENSDARG00000068177	pak2a	2: 36608387 ~ 36636866 (+)
ENSDARG00000067958	sh3gl1a	2: 49457449 ~ 49511458 (+)
ENSDARG00000012016	hpgd	1: 38398696 ~ 38415158 (-)
ENSDARG00000037746	actb1	1: 8649099 ~ 8653385 (-)
ENSDARG00000008305	hand2	1: 38193147 ~ 38195012 (-)
ENSDARG00000041051	mid1ip1a	9: 30263188 ~ 30264415 (-)
ENSDARG00000041339	zgc:92380	9: 48007081 ~ 48039964 (+)
ENSDARG00000075989	arpc2	9: 48043162 ~ 48077034 (-)
ENSDARG00000077777	tmsb4x	9: 54178475 ~ 54180059 (+)
ENSDARG00000046148	tnfaip8l2b	16: 29698565 ~ 29714540 (-)
ENSDARG00000040158	cdc42l	16: 31815244 ~ 31824525 (-)
ENSDARG00000089413	mbpb	16: 6803342 ~ 6849781 (-)
ENSDARG00000076568	sec61b	16: 27224068 ~ 27231659 (+)
ENSDARG00000052652	fermt1	20: 45775935 ~ 45812152 (-)
ENSDARG00000042539	ywhaqa	20: 29565906 ~ 29585336 (+)
ENSDARG00000042876	abracl	20: 36806398 ~ 36818195 (+)
ENSDARG00000016357	fmo5	20: 15093609 ~ 15104709 (-)
ENSDARG00000094752	rpe65b	8: 16688370 ~ 16697912 (-)
ENSDARG00000068409	vgll4l	8: 31099264 ~ 31107537 (-)
ENSDARG00000079745	si:ch211-166a6.5	8: 4445232 ~ 4508248 (-)
ENSDARG00000052917	si:ch211-202f3.3	17: 45577326 ~ 45599190 (+)
ENSDARG00000090228	gsta.1	13: 844143 ~ 852506 (+)
ENSDARG00000012972	cfl1l	13: 33606739 ~ 33609427 (+)
ENSDARG00000040534	epcam	13: 8840772 ~ 8843363 (+)
ENSDARG00000019845	pdlim1	13: 25762908 ~ 25774183 (-)
ENSDARG00000026829	cotl1	18: 13203831 ~ 13216672 (+)
ENSDARG00000042021	mapk12a	18: 14844669 ~ 14860435 (-)
ENSDARG00000014626	dlx3b	12: 5708400 ~ 5711920 (+)
ENSDARG00000033170	sult2st1	12: 630295 ~ 645972 (-)
ENSDARG00000043820	nme2a	12: 20788243 ~ 20796658 (-)
ENSDARG00000103785	sult2st2	12: 648334 ~ 656540 (-)
ENSDARG00000005162	tpm3	19: 10985369 ~ 11031394 (-)
ENSDARG00000036834	krt92	19: 5349656 ~ 5352199 (-)
ENSDARG00000036832	cyt1l	19: 5356421 ~ 5358455 (-)
ENSDARG00000092947	cyt1	19: 5362420 ~ 5364649 (-)
ENSDARG00000042296	dlx5a	19: 41470216 ~ 41472228 (-)
ENSDARG00000032575	ywhaz	19: 12164428 ~ 12193622 (-)
ENSDARG00000116617	spaca4l	19: 18739085 ~ 18751905 (+)
ENSDARG00000013804	capns1b	15: 29113616 ~ 29122830 (+)
ENSDARG00000088091	pfn1	23: 44580254 ~ 44605765 (+)
ENSDARG00000006603	csrp1a	23: 5765514 ~ 5818992 (-)
ENSDARG00000058358	krt8	23: 10249626 ~ 10254288 (-)
ENSDARG00000033738	zgc:153867	23: 28374458 ~ 28388513 (+)
ENSDARG00000057882	arpc3	21: 17024002 ~ 17029464 (+)
ENSDARG00000070787	jupa	11: 11719575 ~ 11781911 (+)
ENSDARG00000059177	tax1bp3	11: 6136220 ~ 6145158 (+)
ENSDARG00000059327	gata2a	11: 3847442 ~ 3865472 (-)
ENSDARG00000014047	cldn7b	10: 22144768 ~ 22150419 (-)
ENSDARG00000045352	cst14a.2	24: 20920563 ~ 20921714 (+)
ENSDARG00000040046	snai2	24: 35387517 ~ 35393533 (+)
ENSDARG00000059279	tfap2a	24: 8721676 ~ 8732519 (-)
ENSDARG00000055715	capn8	22: 26400519 ~ 26435494 (+)
--	fbxo2	--
--	lgals3l	--
--	sepw1	--
--	si:dkey-100n23.4	--
--	si:dkey-152p16.6	--
--	zgc:101000	--
--	gpa33	--
--	ubc.1	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of EVL, Periderm.

Detail Marker Information in Datasets

	Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
	GSE106587 (MZoep mutant)	Danio rerio	embryo	3	EVL, Periderm	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	ENSDARG00000017624 (krt4)	marker	DOI:10.1126/science.aar3131

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: EVL, Periderm

Distribution of EVL, Periderm in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences