DATASET ID: GSE144944 (fgfr3 +|+)

Basic information

Tissue / Organ cranial vault
Experiment type baseline
Sample 1mpf, fgfr3 +/+
Source dataset ID GSM4301248
Project ID GSE144944
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 Osteoblast ENSDARG00000043806 (postna) protein_coding marker DOI:10.1002/jbmr.4042
    1 Osteoblast ENSDARG00000093303 (ifitm1) protein_coding marker DOI:10.1002/jbmr.4042
    2 Chondrocytes ENSDARG00000011407 (col2a1b) protein_coding marker DOI:10.1002/jbmr.4042
    3 Chondrocytes ENSDARG00000011407 (col2a1b) protein_coding marker DOI:10.1002/jbmr.4042
    4 Immune cells ENSDARG00000055186 (ccr9a) protein_coding marker DOI:10.1016/j.celrep.2019.04.030
    4 Immune cells ENSDARG00000041959 (cxcr4b) protein_coding marker DOI:10.1038/nature25969
    5 Chondrocytes ENSDARG00000011407 (col2a1b) protein_coding marker DOI:10.1002/jbmr.4042
    6 Osteoblast ENSDARG00000019516 (sp7) protein_coding marker DOI:10.1002/jbmr.4042
    6 Osteoblast ENSDARG00000044276 (spp1) protein_coding marker DOI:10.1002/jbmr.4042
    6 Osteoblast ENSDARG00000058414 (bglap) protein_coding marker DOI:10.1002/jbmr.4042
    6 Osteoblast ENSDARG00000101535 (col10a1b) protein_coding marker DOI:10.1002/jbmr.4042
    7 Epidermal cells ENSDARG00000102750 (cdh1) protein_coding marker DOI:10.1002/jbmr.4042
    8 Immune cells ENSDARG00000055186 (ccr9a) protein_coding marker DOI:10.1016/j.celrep.2019.04.030
    8 Immune cells ENSDARG00000041959 (cxcr4b) protein_coding marker DOI:10.1038/nature25969
    9 Epidermal cells ENSDARG00000040534 (epcam) protein_coding marker DOI:10.1002/jbmr.4042
    10 Immune cells ENSDARG00000055186 (ccr9a) protein_coding marker DOI:10.1002/jbmr.4042
    10 Immune cells ENSDARG00000041959 (cxcr4b) protein_coding marker DOI:10.1002/jbmr.4042
    11 Epidermal cells ENSDARG00000102750 (cdh1) protein_coding marker DOI:10.1002/jbmr.4042
    12 Immune cells ENSDARG00000055186 (ccr9a) protein_coding marker DOI:10.1016/j.celrep.2019.04.030
    12 Immune cells ENSDARG00000041959 (cxcr4b) protein_coding marker DOI:10.1038/nature25969
    13 Epidermal cells ENSDARG00000102750 (cdh1) protein_coding marker DOI:10.1002/jbmr.4042
    14 Neural crest cells ENSDARG00000021032 (foxd3) protein_coding marker DOI:10.1002/jbmr.4042
    15 Oligodendrocytes ENSDARG00000036186 (mbpa) protein_coding marker DOI:10.1002/jbmr.4042
    16 Periderm cells ENSDARG00000057437 (apodb) protein_coding marker DOI:10.1002/jbmr.4042
    17 Pigment cells ENSDARG00000003732 (mitfa) protein_coding marker DOI:10.1002/jbmr.4042
    17 Pigment cells ENSDARG00000057575 (pnp4a) protein_coding marker DOI:10.1002/jbmr.4042
    17 Pigment cells ENSDARG00000062688 (gpnmb) protein_coding marker DOI:10.1002/jbmr.4042
    17 Pigment cells ENSDARG00000025912 (bscl2l) protein_coding marker DOI:10.1002/jbmr.4042
    18 Macrophages ENSDARG00000077809 (il13) protein_coding marker DOI:10.1002/jbmr.4042
    19 Immune cells ENSDARG00000055186 (ccr9a) protein_coding marker DOI:10.1038/nature25969
    19 Immune cells ENSDARG00000041959 (cxcr4b) protein_coding marker DOI:10.1016/j.celrep.2019.04.030
    20 Immune cells ENSDARG00000055186 (ccr9a) protein_coding marker DOI:10.1016/j.celrep.2019.04.030
    20 Immune cells ENSDARG00000041959 (cxcr4b) protein_coding marker DOI:10.1038/nature25969
    21 Endothelium ENSDARG00000054632 (fli1a) protein_coding marker DOI:10.1016/j.ydbio.2006.08.020
    21 Endothelium ENSDARG00000105215 (kdrl) protein_coding marker DOI:10.1016/j.ydbio.2006.08.020
    21 Endothelium ENSDARG00000004105 (tie1) protein_coding marker DOI:10.1016/j.ydbio.2006.08.020
    21 Endothelium ENSDARG00000077039 (esama) protein_coding marker DOI:10.1016/j.ydbio.2006.08.020

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)