Fish Single-cell RNA Database

GENE ID: ENSDARG00000038384

Symbol	Location	Gene type	Genome version	Species
th2	4: 17380578 ~ 17391091 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000038384 (th2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000045672	il26	4: 13535054 ~ 13538714 (-)
ENSDARG00000045673	il22	4: 13544595 ~ 13548806 (-)
ENSDARG00000045598	akr1b1.2	4: 14906608 ~ 14915268 (-)
ENSDARG00000075501	cdnf	4: 9587968 ~ 9592402 (-)
ENSDARG00000038384	th2	4: 17380578 ~ 17391091 (-)
ENSDARG00000020143	pah	4: 17391680 ~ 17409533 (-)
ENSDARG00000005840	got2b	7: 51774502 ~ 51793881 (+)
ENSDARG00000068557	htr5ab	7: 41080649 ~ 41102498 (-)
ENSDARG00000004406	spra	5: 72129708 ~ 72136548 (-)
ENSDARG00000011091	drd2b	5: 58075301 ~ 58173627 (-)
ENSDARG00000004251	dhfr	5: 26138313 ~ 26146488 (+)
ENSDARG00000038869	htr5aa	2: 29925561 ~ 29940519 (+)
ENSDARG00000037378	qdprb1	1: 22845225 ~ 22851481 (-)
ENSDARG00000086859	qdprb2	1: 24382651 ~ 24385979 (+)
ENSDARG00000090822	zgc:171517	1: 24376394 ~ 24380533 (+)
ENSDARG00000077809	il13	9: 54301736 ~ 54304684 (-)
ENSDARG00000016494	ddc	16: 8298542 ~ 8342749 (-)
ENSDARG00000058553	sprb	8: 1065458 ~ 1070636 (+)
ENSDARG00000053644	got1l1	8: 37755099 ~ 37772150 (+)
ENSDARG00000078157	NA	8: 45708567 ~ 45729758 (-)
ENSDARG00000015110	slc18a2	17: 23782324 ~ 23811332 (+)
ENSDARG00000040190	qdpra	14: 46873229 ~ 46897067 (-)
ENSDARG00000031981	pcbd1	13: 25720969 ~ 25726534 (+)
ENSDARG00000003210	ano2a	18: 7283283 ~ 7304547 (+)
ENSDARG00000075454	hdc	18: 73434 ~ 81280 (-)
ENSDARG00000041068	got2a	18: 21178721 ~ 21188768 (-)
ENSDARG00000069630	tat	18: 13162728 ~ 13179510 (+)
ENSDARG00000107527	slc18a3b	12: 48958913 ~ 48960308 (-)
ENSDARG00000061165	slc6a4a	15: 28609025 ~ 28618502 (-)
ENSDARG00000056804	si:dkey-40g16.6	15: 21694388 ~ 21702317 (-)
ENSDARG00000039077	tyr	15: 43799258 ~ 43818697 (+)
ENSDARG00000057098	htr1ab	21: 20949976 ~ 20951413 (+)
ENSDARG00000069446	dbh	10: 10564261 ~ 10607118 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	Ciliated (cluster: 4)	potential marker	NA
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
GSE130526 (fin)	dorsal and anal fin	baseline	adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA640816 (2dpf)	embryo	baseline	2dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment
GSE158142 (3dpf)	head	baseline	3dpf, untreatment
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
GSE163907 (24hpf)	trunk	baseline	24hpf, trunk tg(sox10:GFP) positive cells
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (WT)	whole body	baseline	6dpf, cd41:GFPlow-WT
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000038384

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences