GENE ID: ENSDARG00000105530

Symbol Location Gene type Genome version Species
si:dkey-19b23.14 7: 20512419 ~ 20515427 (+) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION

Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Leukocytes (cluster: 27)
 marker
 DOI:10.1093/g3journal/jkac062
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Myeloid cells (cluster: 6)
Myeloid cells (cluster: 8)
 potential marker
potential marker
 NA
NA
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Myeloid cells (cluster: 4)
 potential marker
 NA
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Immune cells (cluster: 19)
 potential marker
 NA
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 5)
 potential marker
 NA
GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 6)
 potential marker
 NA
GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 6)
 potential marker
 NA
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Monocytes (cluster: 28)
 potential marker
 NA
GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum
PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured Neutrophils (cluster: 13)
 potential marker
 NA
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Neutrophils (cluster: 10)
 potential marker
 NA
PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury
PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured Macrophages (cluster: 5)
Neutrophils (cluster: 9)
 potential marker
potential marker
 NA
NA
PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Neutrophils (cluster: 11)
 potential marker
 NA
PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Neutrophils (cluster: 15)
 potential marker
 NA
PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury Neutrophils (cluster: 15)
 potential marker
 NA
PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood Granule cells (cluster: 14)
 potential marker
 NA
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Myeloid cells (cluster: 15)
 potential marker
 NA
PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Immune cells (cluster: 10)
 potential marker
 NA
GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases Melanoma cells (cluster: 8)
 potential marker
 NA
GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Neutrophils (cluster: 9)
 potential marker
 NA
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT Neutrophils (cluster: 9)
 potential marker
 NA
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT Neutrophils (cluster: 6)
 potential marker
 NA
GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/- Neutrophils (cluster: 7)
 potential marker
 NA
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT Neutrophils (cluster: 5)
 potential marker
 NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Neutrophils (cluster: 11)
 potential marker
 NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Neutrophils (cluster: 6)
 potential marker
 NA
GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment
GSE158142 (24hpf) head baseline 24hpf, untreatment
GSE158142 (3dpf) head baseline 3dpf, untreatment
PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury
GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days
GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/-

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