GENE ID: ENSDARG00000035127

Symbol Location Gene type Genome version Species
rxrab 5: 64476118 ~ 64511428 (-) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000035127 (rxrab), yellow represents other genes.
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    • EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish NA NA NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain NA NA NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ NA NA NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- NA NA NA
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells NA NA NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development NA NA NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos NA NA NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development NA NA NA
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells NA NA NA
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells NA NA NA
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells NA NA NA
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo NA NA NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development NA NA NA
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment NA NA NA
    GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS NA NA NA
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA NA NA NA
    GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated NA NA NA
    GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA NA NA NA
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS NA NA NA
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS NA NA NA
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS NA NA NA
    GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated NA NA NA
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae NA NA NA
    GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory NA NA NA
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae NA NA NA
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS NA NA NA
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days NA NA NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours NA NA NA
    GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2 NA NA NA
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis NA NA NA
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet NA NA NA
    GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg NA NA NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) NA NA NA
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) NA NA NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone NA NA NA
    PRJNA641144 (C_PRO) tumor disease adult, ZMEL1-PRO cells in vitro co-culture NA NA NA
    PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases NA NA NA
    GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells NA NA NA
    PRJNA641144 (D_INV) tumor disease adult, ZMEL1-INV cells in vitro individual culture NA NA NA
    PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors NA NA NA
    PRJNA641144 (C_INV) tumor disease adult, ZMEL1-INV cells in vitro co-culture NA NA NA
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases NA NA NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells NA NA NA
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- NA NA NA

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